Motif HL_76846.1 Version HL_76846.1 of this group appears in releases 3.88 to 3.88
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 2-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_5J7L_153 | 5J7L | 0.7243 | 1 | DA | LSU rRNA | U | 641 | U | 642 | A | 643 | A | 644 | C | 645 | G | 647 | cWW | |
| 2 | HL_8X5V_002 | 8X5V | 0.0000 | 4 | B | RNA (110-mer) | G | 71 | U | 72 | G | 76 | G | 77 | A | 78 | C | 80 | cWW | tWH |
| 3 | HL_1U9S_001 | 1U9S | 0.5096 | 1 | A | RIBONUCLEASE P | G | 84 | U | 85 | A | 86 | A | 87 | C | 88 | C | 90 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUAACUG | 1 |
| GUUGGGGAUC | 1 |
| GUAACGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAACU | 1 |
| UUGGGGAU | 1 |
| UAACG | 1 |
Release history
| Release | 3.88 |
|---|---|
| Date | 2024-09-11 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-F-F-F-F
- Heat map statistics
- Min 0.51 | Avg 0.46 | Max 0.85
Coloring options: