Motif HL_77652.1 Version HL_77652.1 of this group appears in releases 0.1 to 0.2
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 2-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3PYO_067 | 3PYO | 0.0000 | 1 | A | 23S ribosomal RNA | C | 2794 | G | 2795 | C | 2798 | A | 2799 | A | 2801 | G | 2802 | cWW | tSH |
| 2 | HL_2ZJR_002 | 2ZJR | 0.4516 | 5 | X | LSU rRNA | C | 85 | U | 86 | U | 92 | A | 93 | C | 94 | G | 95 | cWW | |
| 3 | HL_3DHS_005 | 3DHS | 0.5919 | 6 | A | RNase P RNA | C | 313 | G | 314 | G | 321 | C | 322 | A | 323 | G | 324 | cWW | ntSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGUCAAG | 1 |
| CUGGAGAUACG | 1 |
| CGGCGCAUGCAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUCAA | 1 |
| UGGAGAUAC | 1 |
| GGCGCAUGCA | 1 |
Release history
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_77652.1 | Only in the child motif |
|---|---|---|---|
| HL_64371.1 Compare | HL_3DHS_005 | HL_2ZJR_002, HL_3PYO_067 | HL_2A64_006, HL_3IVK_006 |
| HL_02479.1 Compare | HL_2ZJR_002 | HL_3DHS_005, HL_3PYO_067 |
Coloring options: