Motif HL_78774.1 Version HL_78774.1 of this group appears in releases 4.0 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_8VM9_004 | 8VM9 | 0.0000 | 0 | R | Enterovirus 5' cloverleaf cis-acting replication element | G | 15 | G | 16 | U | 17 | A | 18 | U | 19 | C | 20 | C | 21 | C | 22 | A | 23 | C | 24 | cWW | cWW |
| 2 | HL_8SYK_003 | 8SYK | 0.9766 | 3 | A | RNA device 43 truncation mutant 3 (U100C) | G | 57 | A | 58 | A | 59 | G | 60 | A | 61 | C | 65 | G | 66 | A | 67 | C | 68 | C | 69 | cWW | ncWWa |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGUAUCCCAC | 1 |
| GAAGAAUACGACC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUAUCCCA | 1 |
| AAGAAUACGAC | 1 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-F-F-F-F-F-F
- Heat map statistics
- Min 0.98 | Avg 0.49 | Max 0.98
Coloring options: