Motif HL_80492.1 Version HL_80492.1 of this group appears in releases 0.1 to 0.2
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-6 | 2-7 | 3-5 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2BTE_005 | 2BTE | 0.0000 | 5 | tRNA D-loop (H) | E | tRNA | G | 12 | G | 13 | A | 14 | A | 15 | A | 20|||A | G | 21 | A | 22 | C | 23 | cWW | cWS | tSH | cWS |
| 2 | HL_2BTE_001 | 2BTE | 0.0948 | 5 | tRNA D-loop | B | tRNA | G | 12 | G | 13 | A | 14 | A | 15 | A | 20|||A | G | 21 | A | 22 | C | 23 | cWW | cWS | tSH | cWS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGAAUGGGUAGAC | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAAUGGGUAGA | 2 |
Release history
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_80492.1 | Only in the child motif |
|---|---|---|---|
| HL_80492.2 Compare | HL_2BTE_001, HL_2BTE_005 | HL_4AQ7_001 |
- Annotations
-
- tRNA D-loop (1)
- tRNA D-loop (H) (1)
- Basepair signature
- Heat map statistics
- Min 0.09 | Avg 0.05 | Max 0.09
Coloring options: