Motif HL_80634.1 Version HL_80634.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 2-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3J7Y_017 | 3J7Y | 0.0000 | 2 | A | LSU rRNA | U | 2279 | C | 2280 | A | 2281 | C | 2282 | U | 2285 | A | 2286 | cWW | cWW |
| 2 | HL_3JAH_001 | 3JAH | 0.7765 | 6 | 2 | tRNA | G | 12 | U | 13 | A | 14 | G | 15 | U | 22 | C | 23 | cWW | cwW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UCACCCUA | 1 |
| GUAGCGGUUAUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CACCCU | 1 |
| UAGCGGUUAU | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-R
- Heat map statistics
- Min 0.78 | Avg 0.39 | Max 0.78
Coloring options: