#SLoop idPDBDisc#Non-coreChain(s) 1 2 3 4 51-52-4
1 HL_3U5H_0023U5H0.000015C69A70A71C72G74cWWcSW
2 HL_4A1B_0024A1B0.616311U67A68A69C70A72cWWncSH

3D structures

Complete motif including flanking bases
SequenceCounts
CAACCG1
UAACUA1
Non-Watson-Crick part of the motif
SequenceCounts
AACC1
AACU1

Release history

Release1.14
Date2014-04-27
StatusNew id, 2 parents

Parent motifs

Parent motifCommon motif instancesOnly in HL_81510.1Only in the parent motif
HL_76679.1
Compare
HL_3U5H_002HL_4A1B_002
HL_21675.3
Compare
HL_4A1B_002HL_3U5H_002HL_1S72_007

Children motifs

Child motifCommon motif instancesOnly in HL_81510.1Only in the child motif
HL_19626.1
Compare
HL_3U5H_002, HL_4A1B_002HL_4CUV_002, HL_4CUX_004, HL_4NVV_008
Annotations
  • (2)
  • Basepair signature
    cWW-R-R
    Heat map statistics
    Min 0.62 | Avg 0.31 | Max 0.62
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