#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 41-4
1 HL_3D2V_0023D2V0.18614ATPP riboswitch (THI element)G54G55U56C61cWW
2 HL_7TZS_0027TZS0.23334XTPP riboswitch (THI element)G66A67U68C73cWW
3 HL_3K0J_0023K0J0.16634ERNA (87-MER)G66A67U68C73cWW
4 HL_5UD5_0015UD50.00003C tRNAC13A14U15G21cWW
5 HL_3SKL_0073SKL0.28092BRNA (66-MER)A66C67C68U71ncWW
6 HL_3SKI_0033SKI0.25842ARNA (68-MER)A67C68C69U72cWW
7 HL_8KAH_0038KAH0.32783IRNA (65-MER)C86G87A88G92cWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAUAAUGC2
ACCUAU2
GGUAAUGC1
CAUGUAG1
CGAGUCG1
Non-Watson-Crick part of the motif
SequenceCounts
AUAAUG2
CCUA2
GUAAUG1
AUGUA1
GAGUC1

Release history

Release3.88
Date2024-09-11
StatusNew id, > 2 parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (7)
  • Basepair signature
    cWW-F-F
    Heat map statistics
    Min 0.11 | Avg 0.25 | Max 0.51
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