Motif HL_82040.1 Version HL_82040.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4V19_006 | 4V19 | 0.3116 | 1 | A | LSU rRNA | G | 219 | A | 220 | A | 222 | A | 223 | C | 224 | cWW |
| 2 | HL_3J7Y_007 | 3J7Y | 0.0000 | 1 | A | LSU rRNA | G | 1884 | A | 1885 | A | 1887 | G | 1888 | C | 1889 | cWW |
| 3 | HL_3NDB_001 | 3NDB | 0.7537 | 1 | M | SRP RNA | U | 162 | G | 163 | A | 165 | G | 166 | G | 167 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAGAAC | 1 |
| GAGAGC | 1 |
| UGUAGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGAA | 1 |
| AGAG | 1 |
| GUAG | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
Coloring options: