Motif HL_82667.1 Version HL_82667.1 of this group appears in releases 3.2 to 3.2
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 2-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3TUP_001 | 3TUP | 0.1932 | 4 | T | tRNA | C | 13 | A | 14 | G | 15 | U | 16 | A | 21 | G | 22 | cWW | ncWS | |
| 2 | HL_3EPH_001 | 3EPH | 0.0000 | 3 | E | tRNA | C | 13 | A | 14 | G | 15 | U | 16 | A | 21 | G | 22 | cWW | cWS | |
| 3 | HL_1GAX_004 | 1GAX | 0.5763 | 3 | D | TRNA(VAL) | C | 913 | A | 914 | G | 915 | C | 916 | A | 920 | G | 921 | cWW | ||
| 4 | HL_3AMU_001 | 3AMU | 0.8809 | 6 | B | tRNA | U | 13 | A | 14 | G | 15 | C | 16 | A | 21|||C | G | 22 | cWW | ncWS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAGUUGGUAG | 1 |
| CAGUGGUAG | 1 |
| CAGCGGAAG | 1 |
| UAGCCAGGUCAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGUUGGUA | 1 |
| AGUGGUA | 1 |
| AGCGGAA | 1 |
| AGCCAGGUCA | 1 |
Release history
| Release | 3.2 |
|---|---|
| Date | 2018-09-26 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
Coloring options: