Motif HL_82667.2 Version HL_82667.2 of this group appears in releases 3.3 to 3.11
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 2-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3AMU_001 | 3AMU | 0.6931 | 6 | B | tRNA | U | 13 | A | 14 | G | 15 | C | 16 | A | 21|||C | G | 22 | cWW | ncWS | |
| 2 | HL_1GAX_004 | 1GAX | 0.3725 | 3 | D | TRNA(VAL) | C | 913 | A | 914 | G | 915 | C | 916 | A | 920 | G | 921 | cWW | ||
| 3 | HL_5WWT_001 | 5WWT | 0.0000 | 3 | C | tRNA | C | 13 | A | 14 | G | 15 | G | 16 | A | 21 | G | 22 | cWW | ||
| 4 | HL_3TUP_001 | 3TUP | 0.3660 | 4 | T | tRNA | C | 13 | A | 14 | G | 15 | U | 16 | A | 21 | G | 22 | cWW | ncWS | |
| 5 | HL_3EPH_001 | 3EPH | 0.3695 | 3 | E | tRNA | C | 13 | A | 14 | G | 15 | U | 16 | A | 21 | G | 22 | cWW | cWS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAGCCAGGUCAG | 1 |
| CAGCGGAAG | 1 |
| CAGGGGUAG | 1 |
| CAGUUGGUAG | 1 |
| CAGUGGUAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGCCAGGUCA | 1 |
| AGCGGAA | 1 |
| AGGGGUA | 1 |
| AGUUGGUA | 1 |
| AGUGGUA | 1 |
Release history
| Release | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.11 |
|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-10-19 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
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