#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7 81-82-73-6
1 HL_3EGZ_0013EGZ0.95645BTetracycline aptamer and artificial riboswitchG12A13A14G15A16A22C23C24cWWncWWa
2 HL_6ZDU_0016ZDU0.47194CChains: C,DC1271C1272C1273G1274A1275G1279G1281G1282ncWWncWWncWH
3 HL_5EL4_2505EL40.000053L tRNAA51G52G53U54U55C61C62U63ncWWncWW
4 HL_5E81_2485E810.292253L tRNAA51G52G53U54U55C61C62U63ncWWncWW

3D structures

Complete motif including flanking bases
SequenceCounts
AGGUUCGAAUCCU2
GAAGAAUACGACC1
CCCGAAUUGUGG1
Non-Watson-Crick part of the motif
SequenceCounts
GGUUCGAAUCC2
AAGAAUACGAC1
CCGAAUUGUG1

Release history

Release3.88
Date2024-09-11
StatusNew id, 1 parent

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (4)
  • Basepair signature
    cWW-F-F-F-F-F-F
    Heat map statistics
    Min 0.29 | Avg 0.51 | Max 0.97
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