Motif HL_85937.1 Version HL_85937.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 1-16 | 2-15 | 3-12 | 4-13 | 5-10 | 12-14 | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3J7Y_039 | 3J7Y | 0 | 2 | A | LSU rRNA | A | 3176 | A | 3177 | U | 3178 | G | 3179 | A | 3180 | U | 3181 | A | 3182 | C | 3184 | A | 3185 | U | 3186 | C | 3187 | U | 3188 | A | 3190 | A | 3191 | C | 3192 | U | 3193 | cWW | cWW | tWH | tSH | tHW | ncWH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AAUGAUAUCAUCUCAACU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUGAUAUCAUCUCAAC | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-cWW-R-tSH-tWH-R-tHW-R-R-R-R
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: