HL_3J7Y_039

3D structure

PDB id

3J7Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the large ribosomal subunit from human mitochondria

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AAUGAUAUCAUCUCAACU

Length

18 nucleotides

Bulged bases

3J7Y|1|A|U|3183, 3J7Y|1|A|C|3189

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_85937.1

Basepair signature

cWW-cWW-R-tSH-tWH-R-tHW-R-R-R-R

Number of instances in this motif group

1

Unit IDs

3J7Y|1|A|A|3176
3J7Y|1|A|A|3177
3J7Y|1|A|U|3178
3J7Y|1|A|G|3179
3J7Y|1|A|A|3180
3J7Y|1|A|U|3181
3J7Y|1|A|A|3182
3J7Y|1|A|U|3183
3J7Y|1|A|C|3184
3J7Y|1|A|A|3185
3J7Y|1|A|U|3186
3J7Y|1|A|C|3187
3J7Y|1|A|U|3188
3J7Y|1|A|C|3189
3J7Y|1|A|A|3190
3J7Y|1|A|A|3191
3J7Y|1|A|C|3192
3J7Y|1|A|U|3193

Current chains

Chain A

16S rRNA

Nearby chains

Chain 4

bL36

Chain K

uL13

Chain k

mL53

Chain r

bS18a