#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7 8 91-92-83-75-6
1 HL_4JXZ_0014JXZ0.54052B tRNAC912A913A914G915G919U920A921A922G923cWWtSHcWS
2 HL_1QTQ_0011QTQ0.00002B tRNAC912A913A914G915G919U920A921A922G923cWWtSHcWScSH
3 HL_4V7M_0384V7M0.72312AY tRNAC12A13A14G15C16G18A20A21G22cWWntSH

3D structures

Complete motif including flanking bases
SequenceCounts
CAAGCGGUAAG3
Non-Watson-Crick part of the motif
SequenceCounts
AAGCGGUAA3

Release history

Release3.773.783.793.803.813.823.833.843.853.863.87
Date2023-12-062024-01-032024-01-032024-01-312024-02-282024-03-272024-04-242024-05-222024-06-192024-07-172024-08-14
StatusNew id, > 2 parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (3)
  • Basepair signature
    cWW-tSH-cWS-F-F-F
    Heat map statistics
    Min 0.54 | Avg 0.47 | Max 0.87
    Help

    Coloring options:

    HL_4JXZ_001:HL_4JXZ_001 = 0HL_4JXZ_001:HL_1QTQ_001 = 0.5405HL_4JXZ_001:HL_4V7M_038 = 0.8683HL_1QTQ_001:HL_4JXZ_001 = 0.5405HL_1QTQ_001:HL_1QTQ_001 = 0HL_1QTQ_001:HL_4V7M_038 = 0.7231HL_4V7M_038:HL_4JXZ_001 = 0.8683HL_4V7M_038:HL_1QTQ_001 = 0.7231HL_4V7M_038:HL_4V7M_038 = 0HL_4JXZ_001HL_1QTQ_001HL_4V7M_038Discrepancy0.000.200.400.600.80
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