Motif HL_86735.2 Version HL_86735.2 of this group appears in releases 3.87 to 3.87
#S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | HL_5B2P_004 | 5B2P | 0.8113 | 0 | B | Guide RNA | U | 82 | U | 83 | U | 84 | G | 85 | A | 86 | cWW | |
2 | HL_6FQ3_001 | 6FQ3 | 0.0533 | 0 | B | RNA (13-mer) | U | 5 | C | 6 | C | 7 | A | 8 | A | 9 | cWW | |
3 | HL_6FQL_001 | 6FQL | 0.0000 | 0 | B | RNA (13-mer) | U | 5 | U | 6 | U | 7 | A | 8 | A | 9 | cWW | |
4 | HL_8C3A_045 | 8C3A | 0.2650 | 0 | 1 | LSU rRNA | G | 2088 | G | 2089 | U | 2090 | A | 2091 | C | 2092 | cWW | |
5 | HL_5TBW_045 | 5TBW | 0.3289 | 0 | 1 | LSU rRNA | G | 2110 | G | 2111 | U | 2112 | A | 2113 | C | 2114 | cWW | |
6 | HL_8C3A_209 | 8C3A | 1.1745 | 1 | CM | SSU rRNA | C | 762 | C | 763 | U | 764 | U | 765 | G | 767 | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
GGUAC | 2 |
UUUGA | 1 |
UCCAA | 1 |
UUUAA | 1 |
CCUUUG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
GUA | 2 |
UUG | 1 |
CCA | 1 |
UUA | 1 |
CUUU | 1 |
Release history
Release | 3.87 |
---|---|
Date | 2024-08-14 |
Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.Coloring options: