Motif HL_87042.1 Version HL_87042.1 of this group appears in releases 3.2 to 3.11
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4P8Z_002 | 4P8Z | 0.0000 | 1 | A | Lariat capping ribozyme | G | 77 | G | 78 | C | 80 | G | 81 | A | 82 | U | 83 | C | 84 | cWW |
| 2 | HL_4P95_003 | 4P95 | 0.2041 | 1 | A | RNA (192-MER) | G | 295 | G | 296 | C | 298 | G | 299 | A | 300 | U | 301 | C | 302 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGACGAUC | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GACGAU | 2 |
Release history
| Release | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.2 | 3.11 |
|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-09-26 | 2018-10-19 |
| Status | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | New id, no parents | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-R-R-R-R
- Heat map statistics
- Min 0.20 | Avg 0.10 | Max 0.20
Coloring options: