Motif HL_89785.1 Version HL_89785.1 of this group appears in releases 3.9 to 3.14
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 1-23 | 2-22 | 5-8 | 5-9 | 5-18 | 6-10 | 6-19 | 7-11 | 7-21 | 9-12 | 10-13 | 11-16 | 12-17 | 12-18 | 13-19 | 16-21 | |||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_6C65_001 | 6C65 | 0 | 3 | A | RNA (36-MER) | C | 6 | G | 7 | A | 8 | A | 9 | G | 10 | G | 11 | G | 13 | A | 14 | G | 15 | G | 16 | G | 18 | G | 20 | G | 21 | U | 22 | A | 23 | G | 24 | A | 25 | G | 26 | G | 27 | A | 28 | G | 29 | A | 30 | G | 31 | cWW | tSH | tSH | cWH | cHW | cWH | cHW | cHW | cWH | cWH | cWH | cHW | ntSH | cWH | cWH | cHW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGAAGGAGAGGAGAGGUAGAGGAGAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAAGGAGAGGAGAGGUAGAGGAGA | 1 |
- Annotations
- Basepair signature
- cWW-tSH-cWH-cHW-R-cHW-cWH-cHW-cWH-tSH-cHW-R-R-cWH-cWH-cHW-cWH-cWH-tSH-R-R
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: