#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 41-42-3
1 HL_8K0K_0018K0K0.49253JRNA (60-MER)C42G43A47G48cWWtSH
2 HL_361D_002361D0.00002BRNA (20-mer)G86G87A89|||AC90cWWntSH
3 HL_361D_001361D0.03432ARNA (20-mer)G86G87A89|||AC90cWWntSH
4 HL_4V9F_0194V9F0.268030 LSU rRNAG670A671U675C676cWWtSH
5 HL_5J7L_1515J7L0.30043DA LSU rRNAC611G612A616G617cWWtSH
6 HL_5Y58_0015Y580.30445XTLC1U297G298A303A305cWWtSH

3D structures

Complete motif including flanking bases
SequenceCounts
GGCGAC2
CGCAUAG1
GAGUAUC1
CGAAUAG1
UGGCUAAAA1
Non-Watson-Crick part of the motif
SequenceCounts
GCGA2
GCAUA1
AGUAU1
GAAUA1
GGCUAAA1

Release history

Release3.88
Date2024-09-11
StatusUpdated, 1 parent

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (6)
  • Basepair signature
    cWW-tSH
    Heat map statistics
    Min 0.03 | Avg 0.34 | Max 0.90
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