#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 51-5
1 HL_3IVK_0073IVK0.00000Cclass I ligase productC40G41A42A43G44cWW
2 HL_1LNG_0011LNG0.82231B SRP S RNAU162G163A165G166G167cWW

3D structures

Complete motif including flanking bases
SequenceCounts
CGAAG1
UGUAGG1
Non-Watson-Crick part of the motif
SequenceCounts
GAA1
GUAG1

Release history

Release1.51.61.71.81.91.101.111.121.13
Date2013-08-032013-08-312013-09-282013-11-042013-12-072014-01-042014-02-012014-03-012014-03-29
StatusNew id, 2 parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

Parent motifCommon motif instancesOnly in HL_91693.1Only in the parent motif
HL_26057.1
Compare
HL_3IVK_007HL_1LNG_001HL_2ZNI_001
HL_55543.1
Compare
HL_1LNG_001HL_3IVK_007

Children motifs

Child motifCommon motif instancesOnly in HL_91693.1Only in the child motif
HL_91693.2
Compare
HL_1LNG_001, HL_3IVK_007HL_4KR7_002
Annotations
  • (2)
  • Basepair signature
    cWW-R-R
    Heat map statistics
    Min 0.82 | Avg 0.41 | Max 0.82
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