Motif HL_55543.1 Version HL_55543.1 of this group appears in releases 0.3 to 1.4
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 1-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1LNG_001 | 1LNG | 0 | 1 | B | SRP S RNA | U | 162 | G | 163 | A | 165 | G | 166 | G | 167 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGUAGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUAG | 1 |
Release history
| Release | 0.3 | 0.4 | 0.5 | 0.6 | 0.7 | 0.8 | 1.0 | 1.1 | 1.2 | 1.3 | 1.4 |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-03-04 | 2013-04-06 | 2013-05-04 | 2013-06-01 | 2013-07-03 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in HL_55543.1 | Only in the parent motif |
|---|---|---|---|
| HL_47364.1 Compare | HL_1LNG_001 | HL_2BH2_002, HL_2BH2_001 |
Children motifs
| Child motif | Common motif instances | Only in HL_55543.1 | Only in the child motif |
|---|---|---|---|
| HL_91693.1 Compare | HL_1LNG_001 | HL_3IVK_007 |
- Annotations
-
- (1)
- Basepair signature
- cWW-tSH-R
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: