#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6 7 81-8
1 HL_4Y4O_1384Y4O0.000002A LSU rRNAC1451A1452U1453G1455G1456A1457C1458G1459cWW
2 HL_5J7L_1695J7L0.80281Mini UNCG with extended bulgeDA LSU rRNAC1451G1452C1454G1455G1456U1457U1458G1459cWW

3D structures

Complete motif including flanking bases
SequenceCounts
CAUGGACG1
CGACGGUUG1
Non-Watson-Crick part of the motif
SequenceCounts
AUGGAC1
GACGGUU1

Release history

Release3.33.43.53.63.73.83.93.103.23.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.53
Date2018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-09-262018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-05
StatusExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchNew id, no parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (1)
  • Mini UNCG with extended bulge (1)
  • Basepair signature
    cWW-R-R-R-R-R
    Heat map statistics
    Min 0.80 | Avg 0.40 | Max 0.80
    Help

    Coloring options:

    HL_4Y4O_138:HL_4Y4O_138 = 0HL_4Y4O_138:HL_5J7L_169 = 0.8028HL_5J7L_169:HL_4Y4O_138 = 0.8028HL_5J7L_169:HL_5J7L_169 = 0HL_4Y4O_138HL_5J7L_169Discrepancy0.000.200.400.600.80
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