Motif HL_93633.1 Version HL_93633.1 of this group appears in releases 1.5 to 1.8
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2CSX_001 | 2CSX | 0 | 6 | tRNA D-loop | C | RNA (75-MER) | C | 13 | A | 14 | G | 15 | A | 21|||A | G | 22 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAGCUGGUCAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGCUGGUCA | 1 |
Release history
| Release | 1.5 | 1.6 | 1.7 | 1.8 |
|---|---|---|---|---|
| Date | 2013-08-03 | 2013-08-31 | 2013-09-28 | 2013-11-04 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in HL_93633.1 | Only in the parent motif |
|---|---|---|---|
| HL_77555.1 Compare | HL_2CSX_001 | HL_2XZM_016 |
Children motifs
| Child motif | Common motif instances | Only in HL_93633.1 | Only in the child motif |
|---|---|---|---|
| HL_35619.2 Compare | HL_2CSX_001 | HL_3AL0_001, HL_4MGM_003 |
- Annotations
-
- tRNA D-loop (1)
- Basepair signature
- cWW-cWS-R
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: