Motif HL_94981.1 Version HL_94981.1 of this group appears in releases 1.16 to 1.17
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-7 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4OJI_002 | 4OJI | 0 | 0 | T-loop with unstacked turn | A | RNA (52-MER) | G | 23 | U | 24 | C | 25 | C | 26 | C | 27 | A | 28 | A | 29 | G | 30 | C | 31 | C | 32 | cWW | tWH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUCCCAAGCC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UCCCAAGC | 1 |
Release history
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_94981.1 | Only in the child motif |
|---|---|---|---|
| HL_01475.1 Compare | HL_4OJI_002 | HL_4QJD_002, HL_4QJH_004, HL_4QJD_004 |
- Annotations
-
- T-loop with unstacked turn (1)
- Basepair signature
- cWW-R-R-tWH-R-R-R-R
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: