Motif HL_96296.1 Version HL_96296.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 1-9 | 1-13 | 2-13 | 4-11 | 4-12 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3JAM_027 | 3JAM | 0 | 1 | 2 | SSU rRNA | A | 1235 | G | 1236 | A | 1237 | U | 1238 | U | 1239 | G | 1240 | A | 1241 | A | 1243 | G | 1244 | C | 1245 | U | 1246 | C | 1247 | U | 1248 | ncHH | cWW | ncWW | ncSW | ncSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AGAUUGAGAGCUCU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAUUGAGAGCUC | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-R-R-R-R-R-R-R-R-R-R
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: