Motif HL_96851.2 Version HL_96851.2 of this group appears in releases 3.80 to 3.86
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4R4V_002 | 4R4V | 0.2342 | 2 | A | VS ribozyme RNA | G | 670 | A | 673 | C | 674 | A | 675 | C | 676 | cWW |
| 2 | HL_8C3A_077 | 8C3A | 0.0865 | 1 | 4 | 5.8S rRNA | G | 124 | A | 126 | U | 127 | U | 128 | C | 129 | cWW |
| 3 | HL_5TBW_076 | 5TBW | 0.0000 | 1 | 4 | 5.8S rRNA | G | 124 | A | 126 | U | 127 | U | 128 | C | 129 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUAUUC | 2 |
| GAAACAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAUU | 2 |
| AAACA | 1 |
Release history
| Release | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 |
|---|---|---|---|---|---|---|---|
| Date | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-F-F-F
- Heat map statistics
- Min 0.09 | Avg 0.12 | Max 0.23
Coloring options: