#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2break 3 4 51-52-3
1 IL_1FJG_0411FJG0.00003Isolated cWS basepair (H)A SSU rRNAU1052U1056*A1204U1205G1206cWWcWW
2 IL_2PXV_0012PXV0.92954B4.5 S RNAU139G144*C167A168A169cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
UGCAU*AUG1
UACCAG*CAA1
Non-Watson-Crick part of the motif
SequenceCounts
GCA*U1
ACCA*A1

Release history

Release0.20.3
Date2011-12-082011-12-08
StatusNew id, 2 parentsExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_00906.1Only in the parent motif
IL_60928.1
Compare
IL_2PXV_001IL_1FJG_041
IL_96203.1
Compare
IL_1FJG_041IL_2PXV_001

Children motifs

Child motifCommon motif instancesOnly in IL_00906.1Only in the child motif
IL_13561.1
Compare
IL_2PXV_001IL_1FJG_041IL_2GIS_003
IL_98138.1
Compare
IL_1FJG_041IL_2PXV_001
Annotations
  • Isolated cWS basepair (H) (1)
  • (1)
  • Basepair signature
    Heat map statistics
    Min 0.93 | Avg 0.46 | Max 0.93
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