Motif IL_01375.1 Version IL_01375.1 of this group appears in releases 3.2 to 3.11
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-7 | 4-5 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4GMA_002 | 4GMA | 0.0000 | 1 | Z | Adenosylcobalamin riboswitch | G | 86 | U | 87 | G | 88 | G | 90 | * | C | 153 | G | 154 | A | 155 | G | 156 | C | 157 | C | 158 | cWW | ntWH | cWW |
| 2 | IL_4GXY_004 | 4GXY | 0.3262 | 1 | A | Adenosylcobalamin riboswitch | G | 76 | U | 77 | G | 78 | C | 80 | * | G | 148 | G | 149 | A | 150 | G | 151 | U | 152 | C | 153 | cWW | tWH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUGAG*CGAGCC | 1 |
| GUGAC*GGAGUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGA*GAGC | 1 |
| UGA*GAGU | 1 |
Release history
| Release | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.2 | 3.11 |
|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-09-26 | 2018-10-19 |
| Status | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | New id, no parents | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-R-R-tWH-L-R-cWW
- Heat map statistics
- Min 0.33 | Avg 0.16 | Max 0.33
Coloring options: