Motif IL_01994.1 Version IL_01994.1 of this group appears in releases 3.93 to 3.99
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 1-8 | 2-5 | 3-4 | 3-7 | 4-7 | 5-6 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5T83_006 | 5T83 | 0.1386 | 1 | A | Guanidine-I riboswitch | G | 33 | G | 34 | C | 36 | U | 37 | G | 38 | * | C | 21 | G | 22 | C | 23 | cWW | cWH | ncSH | cWW | ntHS | cWW |
| 2 | IL_6DLR_006 | 6DLR | 0.0000 | 1 | A | Guanidine-I riboswitch | G | 36 | G | 37 | C | 39 | U | 40 | G | 41 | * | C | 21 | G | 22 | C | 23 | cWW | cWH | cSH | cWW | tHS | cWW |
| 3 | IL_7MLW_009 | 7MLW | 0.1605 | 0 | F | Guanidine-I riboswitch | U | 43 | G | 44 | C | 45 | U | 46 | G | 47 | * | C | 16 | G | 17 | G | 18 | cWW | cWH | ncSH | cWW | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGUCUG*CGC | 1 |
| GGACUG*CGC | 1 |
| UGCUG*CGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUCU*G | 1 |
| GACU*G | 1 |
| GCU*G | 1 |
Release history
| Release | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 | 3.99 |
|---|---|---|---|---|---|---|---|
| Date | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 | 2025-06-18 | 2025-07-16 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-cWH-tHS-cWW-cSH-cWW
- Heat map statistics
- Min 0.14 | Avg 0.12 | Max 0.22
Coloring options: