Internal Loop Motif Atlas Release 3.97

#	Motif	Core Nts	Instances
1	IL_87907.2 View exemplar Basepair signature: cWW-cWW-cWW History status: Exact match Isolated non-canonical cWW pair (179)	6	179
2	IL_31462.5 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Single bulged A (123) Major groove intercalation (6)	5	129
3	IL_89505.4 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Single bulged U (95) Major groove intercalation (3)	5	117
4	IL_28037.2 View exemplar Basepair signature: cWW-cWW-cWW History status: Exact match Isolated non-canonical cWW pair (65)	6	65
5	IL_10167.5 View exemplar Basepair signature: cWW-cHW-cWW History status: Exact match Isolated cWH basepair (48) Other IL (2) Isolated tWW contact (2) Decoding loop related (1) Decoding loop with one bulged A (1)	6	55
6	IL_00225.13 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Single bulged G (38) Major groove intercalation (2) Stack outside cWW (1)	5	49
7	IL_51454.2 View exemplar Basepair signature: cWW-cSH-cWW History status: Exact match Minor groove platform (42) Minor groove platform related (2)	5	44
8	IL_61258.15 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Single bulged C (35) Major groove intercalation (1)	5	41
9	IL_48076.6 View exemplar Basepair signature: cWW-cSH-cWW History status: Exact match Major groove platform (38) Major groove platform related (1)	5	41
10	IL_85033.2 View exemplar Basepair signature: cWW-cWW-cWW-cWW History status: Exact match Tandem non-canonical cWW pairs (34) tSH-tHW (1)	8	35
11	IL_77658.1 View exemplar Basepair signature: cWW-cWW-cWW-cWW History status: Exact match Tandem non-canonical cWW pairs (33) Isolated cWH basepair with non-canonical cWW (1)	8	34
12	IL_09705.15 View exemplar Basepair signature: cWW-tSH-tHS-cWW History status: Exact match Double sheared (32) Double sheared; A in syn (2)	8	34
13	IL_07785.1 View exemplar Basepair signature: cWW-cWW-cWW History status: Exact match Isolated non-canonical cWW pair (19) Isolated non-canonical cWW with bulges (14)	6	33
14	IL_90729.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Single stack bend (25) Single stack bend with SAM intercalation (2) 90 degree turn (2) Single base bend (1)	5	30
15	IL_82107.4 View exemplar Basepair signature: cWW-cWW History status: Exact match Multiple bulged bases (18) Major groove intercalation (6)	4	30
16	IL_70923.9 View exemplar Basepair signature: cWW-tSS-tSH-L-tHS-tHS-cWW History status: Exact match Kink-turn (27)	12	27
17	IL_50694.7 View exemplar Basepair signature: cWW-tSH-cWW-L History status: Exact match Major groove platform; stack outside cWW (26)	6	27
18	IL_66635.5 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Major groove intercalation (10) Stack outside cWW (9) Multiple bulged bases (3)	5	27
19	IL_57744.1 View exemplar Basepair signature: cWW-cWW-cWW History status: Exact match Isolated non-canonical cWW pair (22)	6	22
20	IL_51387.2 View exemplar Basepair signature: cWW-cSH-cWW-cWW History status: Exact match Major groove platform with extra cWW (6) Major groove minor groove platform with extra cWW (4)	7	20
21	IL_42997.3 View exemplar Basepair signature: cWW-L-R-cWW History status: Exact match Isolated near basepair (5) Isolated cWS basepair (4) Isolated non-canonical cWW pair (2) Isolated non-canonical cWW contact (1)	6	20
22	IL_63596.11 View exemplar Basepair signature: cWW-cWS-cSH-tWH-cWW-L History status: Exact match C-loop (19)	7	19
23	IL_50730.2 View exemplar Basepair signature: cWW-tSH-tHS-tHS-cWW History status: Exact match Triple sheared (19)	10	19
24	IL_68140.4 View exemplar Basepair signature: cWW-cSH-cWW History status: Exact match Major groove minor groove platform; mini C-loop (14) Major groove intercalation (1)	6	18
25	IL_26793.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Single stack bend (16)	5	16
26	IL_38507.2 View exemplar Basepair signature: cWW-tWH-L-tHS-cWW History status: Exact match UAA/GAN (15) Stack outside cWW (1)	9	16
27	IL_49751.4 View exemplar Basepair signature: cWW-cWW-cWW-cWW-cWW History status: Exact match Triple non-canonical cWW pairs (11) Partly complementary (4)	10	16
28	IL_07039.3 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Major groove platform (6) Major groove intercalation (5)	5	16
29	IL_04346.10 View exemplar Basepair signature: cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW History status: Exact match 8x7 Sarcin-Ricin; G-bulge (15)	15	15
30	IL_42626.2 View exemplar Basepair signature: cWW-cWW History status: Exact match Multiple bulged bases (7)	4	14
31	IL_17136.7 View exemplar Basepair signature: cWW-tSH-tHW-tHS-cWW History status: Exact match tSH-tHW-tHS (14)	10	14
32	IL_84476.1 View exemplar Basepair signature: cWW-cWW History status: Exact match Multiple bulged bases (10)	4	13
33	IL_17948.2 View exemplar Basepair signature: cWW-L-R-tSH-tHS-cWW History status: Exact match Double sheared with non-canonical cWW (11) Other IL (1) Double sheared with near cWW (1)	10	13
34	IL_31531.3 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match Decoding loop related (8)	7	13
35	IL_31737.3 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Stack and bulge (2) Decoding loop related (2) Intercalated cWW (2)	5	12
36	IL_95583.2 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Minor groove platform, major groove intercalation (7) Minor groove platform (4)	5	11
37	IL_53448.1 View exemplar Basepair signature: cWW-tWH-cSH-cWW History status: Exact match Receptor of 11-nt loop-receptor motif (11)	8	11
38	IL_82683.2 View exemplar Basepair signature: cWW-L-R-L-cWW-L History status: Exact match	8	11
39	IL_41203.4 View exemplar Basepair signature: cWW-L-cWW-L-L-R-cSH History status: Exact match SSU/LSU pseudoknot (11)	10	11
40	IL_23774.1 View exemplar Basepair signature: cWW-L-R-L-tHS-cWW History status: Exact match UAA/GAN variation (7) UAA/GAN related, with intercalation (4)	9	11
41	IL_64231.5 View exemplar Basepair signature: cWW-cWW-L-R-L-cWW History status: Exact match Minor groove platform related (2) Decoding loop related (1) Tandem non-canonical cWW pairs (1) UAA/GAN related (1) Multiple bulged bases with non-canonical cWW (1)	9	11
42	IL_51479.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match Tandem non-canonical cWW pairs (3)	7	10
43	IL_22551.3 View exemplar Basepair signature: cWW-L-cWW-L History status: Exact match Bulged stacked bases (4) Multiple bulged bases (1)	6	10
44	IL_01488.3 View exemplar Basepair signature: cWW-tSS-tSH-L-R-tHS-L-cWW History status: Exact match Kink-turn (10)	12	10
45	IL_15698.3 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match Major groove platform with extra pair (5)	7	10
46	IL_13404.2 View exemplar Basepair signature: cWW-cWW-cWW-cWW History status: Exact match Tandem non-canonical cWW pairs (9) Non-canonical cWW with near cWH (1)	8	10
47	IL_58103.11 View exemplar Basepair signature: cWW-cSH-cWS-L-tSW-R-R-cWW History status: Exact match Symmetric double minor groove platform (5)	10	9
48	IL_44465.1 View exemplar Basepair signature: cWW-L-R-cWW History status: Exact match Isolated non-canonical cWW contact (4) Isolated non-canonical cWW pair (1) Other IL (1)	6	9
49	IL_26307.2 View exemplar Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-cWW History status: Exact match 7x6 Sarcin-Ricin; G-bulge (8) Sarcin-Ricin target in LSU H95; G-bulge (1)	13	9
50	IL_02555.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Major groove platform with intercalation (4) Minor groove platform (1) Major groove platform (1)	5	9
51	IL_85599.2 View exemplar Basepair signature: cWW-tHS-cWW History status: Exact match Isolated tHS basepair with bulges (5)	6	9
52	IL_69229.3 View exemplar Basepair signature: cWW-L-tSH-L-tHS-cWW-cWW History status: Exact match Kink-turn (8)	12	8
53	IL_90351.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match Minor groove platform with extra cWW (3)	7	8
54	IL_67095.2 View exemplar Basepair signature: cWW-tWW-cWW History status: Exact match Isolated tWW turn (4)	6	8
55	IL_15052.4 View exemplar Basepair signature: cWW-L-cWW-L History status: Exact match Minor groove platform (6)	6	8
56	IL_99358.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match	7	8
57	IL_85536.2 View exemplar Basepair signature: cWW-tSH-L-R-tHS-cWW-cWW History status: Exact match	12	8
58	IL_76758.2 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L History status: Exact match Intercalated tWH (4)	9	7
59	IL_04021.2 View exemplar Basepair signature: cWW-L-R-tSH-tSH-tHS-cWW-cWW History status: Exact match Triple sheared with non-canonical cWW (4)	14	7
60	IL_61476.2 View exemplar Basepair signature: cWW-tSH-L-cWW-L History status: Exact match Isolated tHS basepair with bulges (3)	8	7
61	IL_67767.4 View exemplar Basepair signature: cWW-tWH-cWW-cSH-cWW History status: Exact match Receptor of 11-nt loop-receptor motif (7)	9	7
62	IL_55516.2 View exemplar Basepair signature: cWW-cWW-cSH-cWW History status: Exact match	7	7
63	IL_77691.5 View exemplar Basepair signature: cWW-tSH-L-R-L-cWW History status: Exact match UAA/GAN related (5) UAA/GAN variation (2)	9	7
64	IL_36516.3 View exemplar Basepair signature: cWW-cWW-cSH-cWW-L History status: Exact match 8-nt loop receptor (2) Other IL (1)	8	7
65	IL_22854.4 View exemplar Basepair signature: cWW-tSH-cWW-tHW-R-L-cWW-L-L-R History status: Exact match	14	7
66	IL_47346.2 View exemplar Basepair signature: cWW-tSH-L-R-tHH-tHS-cWW History status: Exact match tSH-tSH-tHH-tHS (4)	12	7
67	IL_80926.1 View exemplar Basepair signature: cWW-cWW-tSH-tHS-L-cWW History status: Exact match	11	7
68	IL_56455.6 View exemplar Basepair signature: cWW-tSH-tHW-L-R-L-R-L-R-tWH-tHS-cWW History status: Exact match Bacterial 5S Loop E (7)	18	7
69	IL_70411.2 View exemplar Basepair signature: cWW-tSH-L-tHH-L-cWW History status: Exact match tHS double platform (3)	10	7
70	IL_88017.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L History status: Exact match	9	7
71	IL_96332.5 View exemplar Basepair signature: cWW-cWW-L-R-L-cWW-L History status: Exact match Tandem non-canonical cWW pairs (2)	10	7
72	IL_54041.2 View exemplar Basepair signature: cWW-L-R-L-R-tWH-L-cWW History status: Exact match tHW-tHW cross-strand stack (4)	11	7
73	IL_49061.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L History status: Exact match Isolated basepair with bulged bases (2) Major groove minor groove platform with extra cWW (2)	8	6
74	IL_51265.3 View exemplar Basepair signature: cWW-tSS-tHS-tSH-cWW-L History status: Exact match Kink-turn from U4 (5) Kink-turn from T-box riboswitch (1)	10	6
75	IL_25186.4 View exemplar Basepair signature: cWW-L-R-L-R-L-R-cWW History status: Exact match	10	6
76	IL_64858.3 View exemplar Basepair signature: cWW-cHW-cWH-R-L-cWH-cHW-cHW-cWH-cWH-cHW-L-cWW-L-R-cWW-L-cWW History status: Exact match G-quadruplex (3)	22	6
77	IL_14368.1 View exemplar Basepair signature: cWW-L-cWW-cSH History status: Exact match Major groove platform with intercalated tWH (5)	6	6
78	IL_06136.2 View exemplar Basepair signature: cWW-tHS-cWW-tHS-tSH-tSH-cWW History status: Exact match Quadruple sheared (4) Triple sheared with non-canonical cWW (1)	12	6
79	IL_42771.1 View exemplar Basepair signature: cWW-cWW History status: Exact match Multiple bulged bases (3) Single bulged A (1) Other IL (1)	4	6
80	IL_49767.8 View exemplar Basepair signature: cWW-cWW-tWH-L-tHS-cWW History status: Exact match UAA/GAN with extra cWW (6)	11	6
81	IL_82426.6 View exemplar Basepair signature: cWW-cHW-R-L-cHW-cHW-cHW-L-cWW-R History status: Exact match Part of G-quadruplex (3)	14	6
82	IL_89021.2 View exemplar Basepair signature: cWW-L-R-L-R-tHS-cWW History status: Exact match UAA/GAN (3) UAA/GAN with extra stack (3)	10	6
83	IL_06549.2 View exemplar Basepair signature: cWW-cWW History status: Exact match Multiple bulged bases (3)	4	6
84	IL_26222.2 View exemplar Basepair signature: cWW-cWS-cSH-tWH-R-L-R-cWW History status: Exact match C-loop with bulged stacked A's (4) C-loop (2)	9	6
85	IL_81516.2 View exemplar Basepair signature: cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L History status: Exact match	16	6
86	IL_68909.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW History status: Exact match	9	6
87	IL_99646.2 View exemplar Basepair signature: cWW-tWH-tHS-cWW History status: Exact match tSH-tHW (3) Other IL (1)	8	6
88	IL_03109.3 View exemplar Basepair signature: cWW-cWS-tWH-cWW-L History status: Exact match C-loop (6)	7	6
89	IL_66798.2 View exemplar Basepair signature: cWW-L-R-L-R-tHS-cWW History status: Exact match AAA cross-strand stack (4) Triple sheared (1)	10	6
90	IL_21200.1 View exemplar Basepair signature: cWW-tSH-tHW-L-cWW-L History status: Exact match tSH-tHW (5)	10	6
91	IL_99692.2 View exemplar Basepair signature: cWW-tSS-tSH-L-R-R-L-cWW-L-L History status: Exact match Kink-turn (6)	13	6
92	IL_42218.2 View exemplar Basepair signature: cWW-L-R-cHW-cWW-L-L-L-R-L History status: Exact match	13	5
93	IL_46174.3 View exemplar Basepair signature: cWW-cSS-tSS-tSH-L-cWW-tHW-cWW History status: Exact match Kink-turn with non-sequential stacking (5)	12	5
94	IL_83389.2 View exemplar Basepair signature: cWW-cWW History status: Exact match	4	5
95	IL_16458.4 View exemplar Basepair signature: cWW-L-R-L-R-cSH-tWH-tHS-cWW History status: Exact match Sarcin-Ricin target in LSU H95; G-bulge (4) 7x6 Sarcin-Ricin; G-bulge (1)	13	5
96	IL_17069.5 View exemplar Basepair signature: cWW-tSH-tHH-cSS-tWW-tHH-tSS-cWW History status: Exact match Kink-turn related (4)	13	5
97	IL_14688.1 View exemplar Basepair signature: cWW-cWW-cWW History status: Exact match	6	5
98	IL_38862.4 View exemplar Basepair signature: cWW-cSH-R-tWH-tHS-cWW History status: Exact match 5x5 Sarcin-Ricin with intercalated A; G-bulge (3) tSH-tHW-tHS (2)	10	5
99	IL_12566.4 View exemplar Basepair signature: cWW-L-tHS-L-cWW-L History status: Exact match	9	5
100	IL_25872.4 View exemplar Basepair signature: cWW-cWW-cWH-cWW History status: Exact match Tandem non-canonical cWW pairs (1)	8	5
101	IL_92446.2 View exemplar Basepair signature: cWW-cWW-R-L-L History status: Exact match	7	5
102	IL_04638.3 View exemplar Basepair signature: cWW-tSH-tHW-tHS-cSH-cWW-L History status: Exact match tSH-tHS-tHW (3)	13	5
103	IL_76308.6 View exemplar Basepair signature: cWW-tSH-tHW-tHS-cWW-cWW History status: Exact match tSH-tHW-tHS-cWW (4)	12	5
104	IL_26598.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R History status: Exact match	10	5
105	IL_57188.5 View exemplar Basepair signature: cWW-tWW-L-tWW-cWW-cSH History status: Exact match Kink-turn related (4)	11	5
106	IL_16386.4 View exemplar Basepair signature: cWW-L-cWW History status: Exact match	5	4
107	IL_54177.4 View exemplar Basepair signature: cWW-cSW-tWH-L-R-L-R-tHS-cWW History status: Exact match Kink-turn related (2)	13	4
108	IL_61438.4 View exemplar Basepair signature: cWW-L-cWW History status: Exact match	5	4
109	IL_22373.1 View exemplar Basepair signature: cWW-L-R-cSH-cSH-cWW History status: Exact match 8-nt loop receptor (3)	8	4
110	IL_47074.2 View exemplar Basepair signature: cWW-L-cWW-L History status: Exact match	6	4
111	IL_47078.3 View exemplar Basepair signature: cWW-cWS-L-cWW-L History status: Exact match Minor groove platform (4)	7	4
112	IL_58112.2 View exemplar Basepair signature: cWW-cWW-L-R-cWW History status: Exact match tWW and non-canonical cWW (1) Tandem non-canonical cWW pairs (1) Non canonical cWW and near pair (1)	8	4
113	IL_60797.1 View exemplar Basepair signature: cWW-cWW-tSH-tHW-tHW-L-R-L-cWW-cWW History status: Exact match	17	4
114	IL_97697.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L-L History status: Exact match Reverse turn (4)	11	4
115	IL_65653.1 View exemplar Basepair signature: cWW-tSW-tHW-tWW-tWH-cSH-L-L-tHS-L-cWW-L History status: Exact match	16	4
116	IL_55953.3 View exemplar Basepair signature: cWW-tSH-tHS-R-L-L-R-cWW History status: Exact match	12	4
117	IL_65718.4 View exemplar Basepair signature: cWW-cSH-cWS-cWW-cWW History status: Exact match	9	4
118	IL_41756.4 View exemplar Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-cWW-L History status: Exact match 8x6 Sarcin-Ricin with inserted Y; G-bulge (4)	14	4
119	IL_50715.3 View exemplar Basepair signature: cWW-tSH-tHH-L-R-L-R-L-tWW-L-cWW-L-L-L-R-L History status: Exact match	21	4
120	IL_04650.2 View exemplar Basepair signature: cWW-cWW-L-cWW-L-R-L-L-cSH History status: Exact match	11	4
121	IL_29198.2 View exemplar Basepair signature: cWW-cWW-L-R-cSH-R-tWH-tHS-cWW History status: Exact match 7x7 Sarcin-Ricin with intercalated A; G-bulge (4)	14	4
122	IL_48444.6 View exemplar Basepair signature: cWW-L-R-cWW-cWW History status: Exact match	8	4
123	IL_38186.6 View exemplar Basepair signature: cWW-L-cWW-L-L-R History status: Exact match	8	4
124	IL_69145.3 View exemplar Basepair signature: cWW-L-cWW-L-R-L-R-R History status: Exact match Pseudoknot (3)	10	4
125	IL_76709.2 View exemplar Basepair signature: cWW-L-cWW-L History status: Exact match Multiple bulged bases (1) Bulged stacked bases (1)	6	4
126	IL_83150.2 View exemplar Basepair signature: cWW-tHH-cWW-L-L History status: Exact match Major groove minor groove platform with tHH (1) C-loop (1)	7	4
127	IL_07469.2 View exemplar Basepair signature: cWW-tSH-cWW-cSH-R-cWW History status: Exact match	10	3
128	IL_03350.1 View exemplar Basepair signature: cWW-tWH-cWW-L-L-cWW-L-L-L History status: Exact match Reverse kink-turn related (3)	13	3
129	IL_74051.1 View exemplar Basepair signature: cWW-tSS-tSH-L-tHS-cWW-L History status: Exact match Kink-turn (3)	11	3
130	IL_05192.4 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L History status: Exact match	10	3
131	IL_94910.1 View exemplar Basepair signature: cWW-tSS-tSH-L-R-R-L-cWW-L History status: Exact match Kink-turn (3)	12	3
132	IL_88116.2 View exemplar Basepair signature: cWW-tSH-L-R-L-R-L-R-cWW-cWW History status: Exact match	14	3
133	IL_46387.1 View exemplar Basepair signature: cWW-cWW-L-cWW-L History status: Exact match	8	3
134	IL_31915.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-cWW History status: Exact match	15	3
135	IL_27393.10 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R History status: Exact match	10	3
136	IL_88269.4 View exemplar Basepair signature: cWW-tWW-cSH-tWH-tHS-cWW History status: Exact match 6x5 Sarcin-Ricin; G-bulge (2) tSH-tHW-tWW (1)	11	3
137	IL_97273.1 View exemplar Basepair signature: cWW-tSH-cWW-L-cWW-L History status: Exact match	9	3
138	IL_69440.3 View exemplar Basepair signature: cWW-L-R-cSH-cWW History status: Exact match	8	3
139	IL_64900.1 View exemplar Basepair signature: cWW-cWW-tSS-tSH-L-tHS-R-cWW-L History status: Exact match Kink-turn (3)	14	3
140	IL_11399.2 View exemplar Basepair signature: cWW-cHW-L-R-L-cWW History status: Exact match	9	3
141	IL_34739.3 View exemplar Basepair signature: cWW-tWW-tWW-L-R-L-R-L-cWW-L-L-R-L-R-L-R-L-R History status: Exact match	20	3
142	IL_82292.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW History status: Exact match Tandem non-canonical cWW pairs with near WC pairs (1)	12	3
143	IL_69543.3 View exemplar Basepair signature: cWW-tSH-L-R-tSS-tHS-L-R-cWW History status: Exact match	12	3
144	IL_32056.1 View exemplar Basepair signature: cWW-L-cWW-L-L-tWH-R-L-R-L History status: Exact match	13	3
145	IL_75283.2 View exemplar Basepair signature: cWW-tSS-L-R-L-tHS-L-cWW-L-tWH-tWH-L-L-R History status: Exact match	18	3
146	IL_22829.2 View exemplar Basepair signature: cWW-L-tHS-L-R-L-cWW-L History status: Exact match	11	3
147	IL_84694.2 View exemplar Basepair signature: cWW-L-R-tSH-tHW-tHH-tHS-cWW-cWW History status: Exact match tSH-tHW-tHH-tHS (2) 9x8 Sarcin-Ricin; G-bulge (1)	16	3
148	IL_01994.1 View exemplar Basepair signature: cWW-cWH-tHS-cWW-cSH-cWW History status: Exact match	8	3
149	IL_80604.6 View exemplar Basepair signature: cWW-cWW-tWH-tWH-tHW-tHW-cWW History status: Exact match tWH-tWH-tHW-tHW (1)	14	3
150	IL_87284.1 View exemplar Basepair signature: cWW-tSH-tHW-tWH-tHS-cWW History status: Exact match tSH-tHW-tWH-tHS (3)	12	3
151	IL_58960.1 View exemplar Basepair signature: cWW-L-cWW-L-tWW-L-R-L History status: Exact match	11	3
152	IL_73452.2 View exemplar Basepair signature: cWW-L-cWW History status: Exact match	5	3
153	IL_82741.2 View exemplar Basepair signature: cWW-L-cWW-L-L History status: Exact match	7	3
154	IL_92634.2 View exemplar Basepair signature: cWW-L-cWW-L-L History status: Exact match	7	3
155	IL_02349.4 View exemplar Basepair signature: cWW-tSH-tWH-cSH-tWH-tHS-cWW History status: Exact match 8x6 Sarcin-Ricin with bulged A; G-bulge (3)	13	3
156	IL_96303.1 View exemplar Basepair signature: cWW-cSH-tSW-tHW-cWW-L-L-R-L-R History status: Exact match	13	3
157	IL_21001.1 View exemplar Basepair signature: cWW-L-R-tHW-L-cWW History status: Exact match	9	3
158	IL_68574.4 View exemplar Basepair signature: cWW-tHH-tHS-cWW History status: Exact match	8	3
159	IL_76319.5 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match Isolated cWS basepair (1)	7	3
160	IL_56987.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Stack outside cWW (1)	5	3
161	IL_18472.4 View exemplar Basepair signature: cWW-tSW-R-L-R-L-R-cWW History status: Exact match	11	3
162	IL_43547.1 View exemplar Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-R-L-cWW-L-cWW History status: Exact match 10x8 Sarcin-Ricin; G-bulge (3)	18	3
163	IL_61299.4 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L History status: Exact match Isolated basepair with bulged bases (1)	9	3
164	IL_16218.2 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW History status: Exact match	9	3
165	IL_24134.1 View exemplar Basepair signature: cWW-tSS-L-R-L-tHS-L-cWW-L-L History status: Exact match Kink-turn (3)	12	3
166	IL_70627.3 View exemplar Basepair signature: cWW-L-R-tHW-cWW History status: Exact match UAA/GAN related (2) UAA/GAN (1)	10	3
167	IL_33761.2 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Other IL (1) Multiple bulged bases (1)	5	3
168	IL_81522.2 View exemplar Basepair signature: cWW-L-L-cWW History status: Exact match Major groove minor groove platform with intercalation; mini C-loop (2)	6	3
169	IL_29346.2 View exemplar Basepair signature: cWW-L-cWW-L-L History status: Exact match Left turn (2)	7	3
170	IL_00555.1 View exemplar Basepair signature: cWW-cWS-cWW-L-R History status: Exact match	8	2
171	IL_79895.1 View exemplar Basepair signature: cWW-L-cWW-L History status: Exact match Other IL (1)	6	2
172	IL_94684.1 View exemplar Basepair signature: cWW-tWH-R-L-cWW-L-L History status: Exact match	9	2
173	IL_10569.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Single stack bend (1)	5	2
174	IL_26728.3 View exemplar Basepair signature: cWW-cSH-R-cSH-cWW-cWW History status: Exact match	9	2
175	IL_33886.1 View exemplar Basepair signature: cWW-L-cWW-L-R-L-R-cWW History status: Exact match Kink-turn with embedded cWW pair (2)	11	2
176	IL_43644.1 View exemplar Basepair signature: cWW-cWW-L-R-cWW History status: Exact match Tandem non-canonical cWW pairs (1) Other IL (1)	8	2
177	IL_66997.2 View exemplar Basepair signature: cWW-L-R-L-cWW-L History status: Exact match	8	2
178	IL_88082.1 View exemplar Basepair signature: cWW-L-tSS-L-cWW-L History status: Exact match	9	2
179	IL_38394.1 View exemplar Basepair signature: cWW-tWH-cWW-L-L-R-L History status: Exact match Stack outside cWW (1)	10	2
180	IL_00881.1 View exemplar Basepair signature: cWW-L-cWW-L History status: Exact match 180 degree turn (1)	6	2
181	IL_42231.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-cWW-cSS-L History status: Exact match	12	2
182	IL_49612.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L History status: Exact match	10	2
183	IL_34470.3 View exemplar Basepair signature: cWW-cSH-cWW-tHH-tWH-tHS-cWW-tSH-R-cWW-L History status: Exact match 9x8 Sarcin-Ricin with GA cWW pair; G-bulge (2)	17	2
184	IL_43858.1 View exemplar Basepair signature: cWW-tSH-cSH-tWH-cSH-cHW-cWH-cWW-cWW History status: Exact match	15	2
185	IL_59877.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match 180 degree turn (1)	5	2
186	IL_81831.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Other IL (1) Intercalated cWS (1)	5	2
187	IL_14177.2 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match	7	2
188	IL_21667.1 View exemplar Basepair signature: cWW-tSH-L-R-L-cWW History status: Exact match	11	2
189	IL_69271.3 View exemplar Basepair signature: cWW-cWW-L-R-L-cWW-L-L-R History status: Exact match	14	2
190	IL_84251.1 View exemplar Basepair signature: cWW-L-tHS-cWW History status: Exact match	8	2
191	IL_00981.1 View exemplar Basepair signature: cWW-tWH-tHH-tHS-cWW History status: Exact match	10	2
192	IL_80231.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-tHS-cWW History status: Exact match Triple sheared related (1) Other IL (1)	11	2
193	IL_11344.2 View exemplar Basepair signature: cWW-cSS-L-cWW History status: Exact match 180 degree turn (2)	7	2
194	IL_19668.1 View exemplar Basepair signature: cWW-cWW-L-cWW-L History status: Exact match Isolated non-canonical cWW pair (2)	8	2
195	IL_74367.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-cWW History status: Exact match	10	2
196	IL_38634.5 View exemplar Basepair signature: cWW-cWH-L-R-cWW History status: Exact match cWH basepair and non-canonical AC (2)	8	2
197	IL_77278.1 View exemplar Basepair signature: cWW-tWW-L-tWW-cWW-L History status: Exact match	10	2
198	IL_91592.1 View exemplar Basepair signature: cWW-L-tHH-L-cWW-L-L History status: Exact match	10	2
199	IL_09129.2 View exemplar Basepair signature: cWW-L-R-tWH-L-R-L-tWW-cWW History status: Exact match	14	2
200	IL_71294.3 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW History status: Exact match tSH-tHW-tHS-cWW (1) Double sheared; A in syn; two near cWW pairs (1)	12	2
201	IL_95570.1 View exemplar Basepair signature: cWW-cWH-R-L-cWW History status: Exact match	7	2
202	IL_28026.3 View exemplar Basepair signature: cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW History status: Exact match	15	2
203	IL_74746.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-cWW History status: Exact match	16	2
204	IL_88974.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L-R-L-R History status: Exact match	12	2
205	IL_25463.1 View exemplar Basepair signature: cWW-L-cWW-L-L History status: Exact match	7	2
206	IL_65594.1 View exemplar Basepair signature: cWW-L-R-tSW-tHH-cSH-tWH-tHS-cWW History status: Exact match 8x7 Sarcin-Ricin; G-bulge (2)	15	2
207	IL_04332.3 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L-R-L-R-L History status: Exact match	13	2
208	IL_19897.3 View exemplar Basepair signature: cWW-L-cWW-L-L-tWH-R-L History status: Exact match	11	2
209	IL_34822.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW History status: Exact match	12	2
210	IL_22564.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW History status: Exact match	10	2
211	IL_30730.1 View exemplar Basepair signature: cWW-cSH-L-R-L-cWW-L-R History status: Exact match	10	2
212	IL_91698.1 View exemplar Basepair signature: cWW-tWW-L-R-L-R-L-R-L-tHW-R-L-cWW History status: Exact match	17	2
213	IL_58126.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-cWW History status: Exact match	15	2
214	IL_20047.1 View exemplar Basepair signature: cWW-tSH-tWH-cSH-cHW-cWH-cWW-cWW History status: Exact match	11	2
215	IL_44624.1 View exemplar Basepair signature: cWW-tWH-cWW-L-cWW-tSS-cSS-cWW-L History status: Exact match	14	2
216	IL_63519.1 View exemplar Basepair signature: cWW-cWW-L-R-cSH-cWW History status: Exact match	9	2
217	IL_77870.1 View exemplar Basepair signature: cWW-L-R-L-tHS-L-cWW-L-cWW History status: Exact match	13	2
218	IL_73355.1 View exemplar Basepair signature: cWW-L-cWW-L History status: Exact match	6	2
219	IL_12697.1 View exemplar Basepair signature: cWW-cWW-L-R-tHS-cWW History status: Exact match	10	2
220	IL_53581.1 View exemplar Basepair signature: cWW-tWW-L-tWH-cSS-tSS-tWH-cSS-tWH-R-tSS-R-L-L-cWW-L-cWW History status: Exact match Kink-turn related (2)	22	2
221	IL_75294.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW History status: Exact match Other IL (1)	9	2
222	IL_82706.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match	7	2
223	IL_06691.1 View exemplar Basepair signature: cWW-cWS-L-R-L-R-cWW-L History status: Exact match	11	2
224	IL_15218.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R-L-R-L History status: Exact match	13	2
225	IL_41344.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match	7	2
226	IL_56317.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW History status: Exact match	9	2
227	IL_70335.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match	7	2
228	IL_78349.3 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-cWW-L-L History status: Exact match	14	2
229	IL_09990.4 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match	7	2
230	IL_33323.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L History status: Exact match	9	2
231	IL_65851.3 View exemplar Basepair signature: cWW-cWW-cWW-cWW-R-tHW-tSH-tHS-L History status: Exact match tSH-tHW-tHS with extra cWW pairs (1)	14	2
232	IL_45444.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW History status: Exact match	10	2
233	IL_53596.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L History status: Exact match	10	2
234	IL_23038.1 View exemplar Basepair signature: cWW-L-R-tWH-L-R-L-cWW-cWW History status: Exact match	13	2
235	IL_18354.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R-L-R History status: Exact match	12	2
236	IL_59049.1 View exemplar Basepair signature: cWW-cWW-L-R-L-R-L-R-L-R-L-cWW-L History status: Exact match	16	2
237	IL_82968.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R-L History status: Exact match	11	2
238	IL_64048.1 View exemplar Basepair signature: cWW-L-cWW-L-L-tWH-R-L-R History status: Exact match	12	2
239	IL_78800.1 View exemplar Basepair signature: cWW-cSH-L-cWW History status: Exact match	6	2
240	IL_10389.1 View exemplar Basepair signature: cWW-L-cWW-L-cWW History status: Exact match Isolated non-canonical cWW pair (1)	8	2
241	IL_33711.1 View exemplar Basepair signature: cWW-cSH-cWW-L-L-R-L History status: Exact match Minor groove platform (2)	9	2
242	IL_21173.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R-L History status: Exact match	11	2
243	IL_29223.1 View exemplar Basepair signature: cWW-L-R-L-cWW-cWW-cWW History status: Exact match	11	2
244	IL_83149.1 View exemplar Basepair signature: cWW-tSH-tHH-L-R-L-R-L-R-L-R-L-R-L-R-L-cWW-L-cWW History status: Exact match	24	2
245	IL_89984.3 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match	7	2
246	IL_42032.1 View exemplar Basepair signature: cWW-cSH-cWW-tWH-L-cWW-L-L History status: Exact match	11	2
247	IL_10484.1 View exemplar Basepair signature: cWW-tSH-tHS-cWW History status: Exact match Double sheared (2)	8	2
248	IL_18487.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-cWW-cWW History status: Exact match	13	2
249	IL_43622.1 View exemplar Basepair signature: cWW-cWW-L-cWW-L History status: Exact match	8	2
250	IL_59302.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L History status: Exact match	9	2
251	IL_73789.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L History status: Exact match	8	2
252	IL_04785.1 View exemplar Basepair signature: cWW-L-R-L-R-cWW History status: Exact match tWW and near cWH (1)	8	2
253	IL_61341.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match	7	2
254	IL_24254.1 View exemplar Basepair signature: cWW-cWW-tHH-cSH-tWH-tHS-cWW History status: Exact match 7x6 Sarcin-Ricin with UU cWW pair; G-bulge (1)	13	1
255	IL_31561.1 View exemplar Basepair signature: cWW-L-R-tWH-tWH-L-R-L-cWW History status: Exact match	13	1
256	IL_57741.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-cWW-L-cWW History status: Exact match	16	1
257	IL_64403.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-cWW-L-L-R History status: Exact match	14	1
258	IL_70670.1 View exemplar Basepair signature: cWW-R-L-R-L-R-L-R-L-R-L-R-tWH-L-R-L History status: Exact match 9x9 Sarcin-Ricin with pseudoknotted region; G-bulge (1)	18	1
259	IL_85630.1 View exemplar Basepair signature: cWW-tSH-L-R-L-R-L-cWW-L-cWW-L History status: Exact match	15	1
260	IL_19048.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cSH-L-R-cWW-cWW History status: Exact match	14	1
261	IL_59724.1 View exemplar Basepair signature: cWW-L-R-L-R-cSH-tWH-tHS-R-L-cWW History status: Exact match 8x7 Sarcin-Ricin with CC bifurcated pair; G-bulge (1)	15	1
262	IL_81731.1 View exemplar Basepair signature: cWW-cWW-L-R-L-R-L-cWW-L-tWW-L-R-L History status: Exact match	17	1
263	IL_96759.1 View exemplar Basepair signature: cWW-tSH-tWW-cWW History status: Exact match	8	1
264	IL_13874.1 View exemplar Basepair signature: cWW-cWH-tHS-cWW-cSH-cWH-cHW-cWW History status: Exact match	12	1
265	IL_21630.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-cSH-R-tWH-R-cWW-cWW History status: Exact match	17	1
266	IL_29357.1 View exemplar Basepair signature: cWW-L-R-L-R-cWH-tHW-cSH-cWW-L-L-cWW-R-R History status: Exact match	18	1
267	IL_24499.1 View exemplar Basepair signature: cWW-cWS-L-R-L-R-cWW-L-cSH-L History status: Exact match	12	1
268	IL_64842.1 View exemplar Basepair signature: cWW-L-tWH-L-cWW-L-cSH History status: Exact match	10	1
269	IL_70801.1 View exemplar Basepair signature: cWW-cWW-L-R-tWW-L-R-L-cWW History status: Exact match	13	1
270	IL_80209.1 View exemplar Basepair signature: cWW-cHW-L-cWW-L-L-R-L-R-L History status: Exact match	13	1
271	IL_85652.1 View exemplar Basepair signature: cWW-tSH-L-R-L-R-L-cWW-L History status: Exact match	12	1
272	IL_10796.1 View exemplar Basepair signature: cWW-L-R-cWW History status: Exact match	6	1
273	IL_19516.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L-cWW-L-L-L-R-L-R History status: Exact match Pseudoknot (1)	18	1
274	IL_74184.1 View exemplar Basepair signature: cWW-L-tHS-L-cWW-L-L-L History status: Exact match	11	1
275	IL_96788.1 View exemplar Basepair signature: cWW-tHW-tHS-cWW-cWW History status: Exact match	10	1
276	IL_05472.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-cWW-L History status: Exact match	14	1
277	IL_29471.1 View exemplar Basepair signature: cWW-cWW-L-tHS-L-cWW History status: Exact match	10	1
278	IL_54737.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R History status: Exact match	20	1
279	IL_61440.1 View exemplar Basepair signature: cWW-tSH-tHS-tWS-cWW History status: Exact match Triple sheared (1)	10	1
280	IL_77045.1 View exemplar Basepair signature: cWW-L-tSW-L-tHW-cWW-L History status: Exact match Kink-turn (1)	11	1
281	IL_09044.1 View exemplar Basepair signature: cWW-tSH-tHH-L-tHS-cWW History status: Exact match	11	1
282	IL_16665.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-cWW History status: Exact match	11	1
283	IL_42314.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match	7	1
284	IL_49714.1 View exemplar Basepair signature: cWW-L-cWW-L-L History status: Exact match Major groove intercalation (1)	7	1
285	IL_57881.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Multiple bulged bases (1)	5	1
286	IL_85879.1 View exemplar Basepair signature: cWW-L-R-tHW-tHW-L-R-L-R-cWW-cWW History status: Exact match	16	1
287	IL_94967.1 View exemplar Basepair signature: cWW-L-cWW-L History status: Exact match	6	1
288	IL_04073.1 View exemplar Basepair signature: cWW-L-R-L-tSH-L-R-cWW-L-R-R-L-cWW-L History status: Exact match	18	1
289	IL_34737.1 View exemplar Basepair signature: cWW-L-cHW-L-cWW-L History status: Exact match	9	1
290	IL_44325.1 View exemplar Basepair signature: cWW-cWH-cWW-L History status: Exact match	6	1
291	IL_60448.1 View exemplar Basepair signature: cWW-L-cWW-L-R-L-tWH-L-tHS-L-R-L-cWW-L-R History status: Exact match	20	1
292	IL_67623.1 View exemplar Basepair signature: cWW-tSW-cSW-L-cSW-L-R-L-cWW-cWW History status: Exact match Minor groove platform related (1)	14	1
293	IL_06029.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L-L-R-L-R-L-R-L History status: Exact match Kink-turn (1)	17	1
294	IL_29826.1 View exemplar Basepair signature: cWW-tSH-tHH-L-R-L-R-cSH-R-R-L-R-L-R-L-R-L-R-L-cWW History status: Exact match	25	1
295	IL_54896.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L-R-L-R History status: Exact match	12	1
296	IL_84409.1 View exemplar Basepair signature: cWW-tSS-L-cWH-L-cSH-cHW-tWH-cSS-tWH-tSW-cWS-R-L-R-cSH-R-cWW-L History status: Exact match	23	1
297	IL_01038.1 View exemplar Basepair signature: cWW-tWH-L-R-tHS-cWW History status: Exact match UAA/GAN with extra stack (1)	10	1
298	IL_25412.1 View exemplar Basepair signature: cWW-L-cWW-L-L History status: Exact match Major groove intercalation (1)	7	1
299	IL_32016.1 View exemplar Basepair signature: cWW-tSH-tSH-tSS-tHS-L-R-cWW History status: Exact match Kink-turn (1)	12	1
300	IL_80298.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R History status: Exact match	24	1
301	IL_86012.1 View exemplar Basepair signature: cWW-tHS-tWH-cWH-cWW-L-L-cWW History status: Exact match	13	1
302	IL_04307.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-cWW-L-L-R History status: Exact match	16	1
303	IL_19852.1 View exemplar Basepair signature: cWW-tWH-cWW-cWH-cWH-cWH History status: Exact match Part of G-quadruplex (1)	11	1
304	IL_44438.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW History status: Exact match	12	1
305	IL_60657.1 View exemplar Basepair signature: cWW-cWW-L-R-L-cWW-L-L-R-L-R-L-R History status: Exact match	16	1
306	IL_97631.1 View exemplar Basepair signature: cWW-L-R-L-R-L-tHS-cWW History status: Exact match Triple sheared related (1)	11	1
307	IL_30441.1 View exemplar Basepair signature: cWW-cSH-tSW-tHW-cWW-L-L-R-L-L-R History status: Exact match	14	1
308	IL_62012.1 View exemplar Basepair signature: cWW-cWW-L-R-L-cWW History status: Exact match Decoding loop related (1)	9	1
309	IL_91636.1 View exemplar Basepair signature: cWW-tSH-L-R-L-cWW-L-L History status: Exact match	11	1
310	IL_01176.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-cWW History status: Exact match	11	1
311	IL_09570.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L-L-R History status: Exact match	12	1
312	IL_71598.1 View exemplar Basepair signature: cWW-tSH-L-cWW-L History status: Exact match	8	1
313	IL_80398.1 View exemplar Basepair signature: cWW-L-cSW-L-R-cWW History status: Exact match Minor groove platform (1)	8	1
314	IL_86136.1 View exemplar Basepair signature: cWW-tSH-L-cWW-L-L-R-L History status: Exact match	11	1
315	IL_11415.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L History status: Exact match	8	1
316	IL_52743.1 View exemplar Basepair signature: cWW-tSW-L-cSW-L-cWW-L History status: Exact match	10	1
317	IL_67780.1 View exemplar Basepair signature: cWW-cSH-L-R-L-L-R-L History status: Exact match	10	1
318	IL_74957.1 View exemplar Basepair signature: cWW-L-cHW-L-cWW-L History status: Exact match cWH basepair with bulged bases (1)	9	1
319	IL_06300.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW History status: Exact match	9	1
320	IL_38969.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L History status: Exact match Reverse kink-turn related (1)	9	1
321	IL_47087.1 View exemplar Basepair signature: cWW-L-cWW-L-cWW-tWH-L-L History status: Exact match Kink-turn related (1)	11	1
322	IL_55917.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R History status: Exact match	8	1
323	IL_62654.1 View exemplar Basepair signature: cWW-tSH-tHH-tHS-cWW History status: Exact match tSH-tHH-tHS (1)	10	1
324	IL_69986.1 View exemplar Basepair signature: cWW-cHW-L-R-L-R-cWH-cWW History status: Exact match	12	1
325	IL_84665.1 View exemplar Basepair signature: cWW-L-cSW-cWW-L-L-R-L-R-L-R-L History status: Exact match	15	1
326	IL_17765.1 View exemplar Basepair signature: cWW-tWH-cHW-L-tSS-cSS-cWW-R-L History status: Exact match	14	1
327	IL_25573.1 View exemplar Basepair signature: cWW-tSW-L-cWW-L-L History status: Exact match	8	1
328	IL_32357.1 View exemplar Basepair signature: cWW-L-cWW-cWW History status: Exact match	7	1
329	IL_42778.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-cWW History status: Exact match	11	1
330	IL_49867.1 View exemplar Basepair signature: cWW-cWW-L-R-L-R-tHW-R-L-L-cWW History status: Exact match	15	1
331	IL_73002.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-cWW-L-L-R History status: Exact match	16	1
332	IL_80412.1 View exemplar Basepair signature: cWW-tSW-L-cWW-L-L-R-L History status: Exact match	11	1
333	IL_87211.1 View exemplar Basepair signature: cWW-cSW-L-cWW-L History status: Exact match	7	1
334	IL_95727.1 View exemplar Basepair signature: cWW-L-tSH-L-tHW-tHS-R-cWW-L History status: Exact match Kink-turn (1)	14	1
335	IL_28304.1 View exemplar Basepair signature: cWW-R-L-R-L-R-L-R-L-L-L-cWW-cWW History status: Exact match	16	1
336	IL_61242.1 View exemplar Basepair signature: cWW-cWW-L-R-L-R-cWW History status: Exact match	10	1
337	IL_89047.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-cWH-L-cWW History status: Exact match	16	1
338	IL_98347.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match	7	1
339	IL_15107.1 View exemplar Basepair signature: cWW-R-L-R-L-R-L-R-L-R-L-R-L-L-L-cWW History status: Exact match	18	1
340	IL_31084.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-cWW-L History status: Exact match	12	1
341	IL_47108.1 View exemplar Basepair signature: cWW-L-R-L-tHH-L-cWW History status: Exact match	9	1
342	IL_70096.1 View exemplar Basepair signature: cWW-L-cWW-cWW History status: Exact match Kink-turn related (1)	7	1
343	IL_91920.1 View exemplar Basepair signature: cWW-cWW-tHH-cWW History status: Exact match	8	1
344	IL_09908.1 View exemplar Basepair signature: cWW-L-tHH-L-R-L-cWW-L History status: Exact match Reverse kink-turn (1)	11	1
345	IL_33141.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L-L History status: Exact match	11	1
346	IL_49971.1 View exemplar Basepair signature: cWW-cWH-cWW-cWW-L-L-R History status: Exact match	10	1
347	IL_58350.1 View exemplar Basepair signature: cWW-L-R-tWH-tWH-L-R-L-cWW-L History status: Exact match	14	1
348	IL_95811.1 View exemplar Basepair signature: cWW-L-cWW-L-cWW-L-R-L History status: Exact match Vitamin B12 Aptamer (1)	11	1
349	IL_04600.1 View exemplar Basepair signature: cWW-cWW-L-R-L-R-L-R-cWW-cWW History status: Exact match	14	1
350	IL_20245.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-cWW-L-L-R-L History status: Exact match	18	1
351	IL_28564.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match	7	1
352	IL_36729.1 View exemplar Basepair signature: cWW-cWW-L-R-L-R-L-R-tWH-R-L-R-L-cWW History status: Exact match	17	1
353	IL_44874.1 View exemplar Basepair signature: cWW-tSH-tHW-L-cWW-L-L History status: Exact match tSH-tHW (1)	11	1
354	IL_61249.1 View exemplar Basepair signature: cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW History status: Exact match	20	1
355	IL_68243.1 View exemplar Basepair signature: cWW-L-cWW-cWW-R-L-tHS-cWW History status: Exact match	13	1
356	IL_89099.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW History status: Exact match Other IL (1)	12	1
357	IL_02203.1 View exemplar Basepair signature: cWW-cSW-cWW-cWW History status: Exact match	8	1
358	IL_17973.1 View exemplar Basepair signature: cWW-cWW-L-cWW-L-L-R-L-R-L-R-L-R-L-R History status: Exact match	18	1
359	IL_43140.1 View exemplar Basepair signature: cWW-L-cWW-cWH-L-L History status: Exact match	9	1
360	IL_87290.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L History status: Exact match Kink-turn related (1)	15	1
361	IL_96236.1 View exemplar Basepair signature: cWW-tWW-cWW-L-cWW History status: Exact match	9	1
362	IL_12745.1 View exemplar Basepair signature: cWW-tWH-tWH-tHW-tHW-cWW History status: Exact match tWH-tWH-tHW-tHW (1)	12	1
363	IL_20463.1 View exemplar Basepair signature: cWW-tSH-tHW-cSH-tHH-cWH-L-R-cWW-L-L-R History status: Exact match 7x11 Sarcin-Ricin with pseudoknotted region; G-bulge (1)	18	1
364	IL_28788.1 View exemplar Basepair signature: cWW-L-R-cWW History status: Exact match	6	1
365	IL_37015.1 View exemplar Basepair signature: cWW-tSS-tSS-tHH-L-tHS-L-R-cWW-L History status: Exact match	13	1
366	IL_68405.1 View exemplar Basepair signature: cWW-cSS-L-tWH-tHW-cWW-cWW History status: Exact match Kink-turn related (1)	11	1
367	IL_89312.1 View exemplar Basepair signature: cWW-tSH-L-cWS-cWW-L History status: Exact match	10	1
368	IL_99380.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R History status: Exact match	8	1
369	IL_31504.1 View exemplar Basepair signature: cWW-cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L History status: Exact match	18	1
370	IL_47972.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L History status: Exact match	8	1
371	IL_63775.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match	5	1
372	IL_70376.1 View exemplar Basepair signature: cWW-L-cWW-L History status: Exact match	6	1
373	IL_78472.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-cWW-L-L History status: Exact match	13	1
374	IL_85222.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L-L History status: Exact match	11	1
375	IL_33623.1 View exemplar Basepair signature: cWW-L-tHH-L-R-L-cWW-L-R History status: Exact match	12	1
376	IL_43467.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-cWW-L-L-R-L History status: Exact match Pseudoknot (1)	17	1
377	IL_73700.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-cWW-tHS-cWW History status: Exact match	13	1
378	IL_81392.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L-L-R-L History status: Exact match	13	1
379	IL_13358.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-cWW-L-L History status: Exact match	13	1
380	IL_37603.1 View exemplar Basepair signature: cWW-L-cWW-L-cWW-L-L History status: Exact match	10	1
381	IL_45896.1 View exemplar Basepair signature: cWW-cWW-cWW History status: Exact match	11	1
382	IL_53787.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R-L-R-L-R History status: Exact match Pseudoknot (1)	14	1
383	IL_61286.1 View exemplar Basepair signature: cWW-L-R-L-R-L-tWH-L-tHS-cWW History status: Exact match 8x6 Sarcin-Ricin with inserted A; G-bulge (1)	14	1
384	IL_99498.1 View exemplar Basepair signature: cWW-L-R-tHW-cWW History status: Exact match	8	1
385	IL_07171.1 View exemplar Basepair signature: cWW-L-cWW-L History status: Exact match Bulged stacked bases (1)	6	1
386	IL_15991.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-cWW-L-L History status: Exact match	21	1
387	IL_41853.1 View exemplar Basepair signature: cWW-L-tHH-L-tHS-L-cWW-L-L History status: Exact match	13	1
388	IL_93889.1 View exemplar Basepair signature: cWW-R-tSH-L-cSH-L-L-R-L-R-L-R-L-R-L-R-L-L History status: Exact match	21	1
389	IL_59258.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L-cWW History status: Exact match	12	1
390	IL_66663.1 View exemplar Basepair signature: cWW-L-tHS-tSW-tWH-cWH-cWW-L-cWW History status: Exact match	15	1
391	IL_73759.1 View exemplar Basepair signature: cWW-cSH-tHS-cWH-cHW-cWW History status: Exact match Part of G-quadruplex (1)	9	1
392	IL_04736.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW History status: Exact match	12	1
393	IL_13394.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R History status: Exact match	21	1
394	IL_37752.1 View exemplar Basepair signature: cWW-L-R-L-R-tHW-R-L-cWW History status: Exact match	12	1
395	IL_46086.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R History status: Exact match	8	1
396	IL_76460.1 View exemplar Basepair signature: cWW-cWW-L-tHS-L-R-L-cWW-L-L-R-L-L-R-L-R-L-R History status: Exact match	22	1
397	IL_07173.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L History status: Exact match	8	1
398	IL_31558.1 View exemplar Basepair signature: cWW-L-tHS-L-R-cWW History status: Exact match	9	1
399	IL_79846.1 View exemplar Basepair signature: cWW-R-L-L-tWH-cWW-L-L-L-R-L-R-cSH-L-L History status: Exact match	19	1
400	IL_94351.1 View exemplar Basepair signature: cWW-L-R-L-R-L-tHS-cWW History status: Exact match	11	1
401	IL_26685.1 View exemplar Basepair signature: cWW-L-cWW-L History status: Exact match Multiple bulged bases (1)	6	1
402	IL_51191.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L History status: Exact match	9	1
403	IL_88072.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L-R-L-R-L History status: Exact match	13	1
404	IL_96371.1 View exemplar Basepair signature: cWW-tHH-cWW History status: Exact match	6	1
405	IL_46112.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L History status: Exact match	9	1
406	IL_54050.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L-L History status: Exact match	11	1
407	IL_90346.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L History status: Exact match	9	1

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Nucleotide numbers

Exact match 407;

Internal Loop Motif Atlas Release 3.97 Download CSV JSON annotations

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