Motif IL_04550.1 Version IL_04550.1 of this group appears in releases 1.1 to 1.4
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-6 | 4-5 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_255D_001 | 255D | 0 | 0 | Tandem non-canonical cWW pairs | A | RNA (12-mer) | U | 5 | U | 6 | C | 7 | G | 8 | * | U | 5||||2_656 | U | 6||||2_656 | C | 7||||2_656 | G | 8||||2_656 | cWW | cWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUCG*UUCG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UC*UC | 1 |
Release history
| Release | 1.1 | 1.2 | 1.3 | 1.4 |
|---|---|---|---|---|
| Date | 2013-04-08 | 2013-05-04 | 2013-06-01 | 2013-07-01 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in IL_04550.1 | Only in the parent motif |
|---|---|---|---|
| IL_64648.1 Compare | IL_255D_001 | IL_2QBG_046 |
Children motifs
| Child motif | Common motif instances | Only in IL_04550.1 | Only in the child motif |
|---|---|---|---|
| IL_30381.1 Compare | IL_255D_001 | IL_2QBG_046 |
- Annotations
-
- Tandem non-canonical cWW pairs (1)
- Basepair signature
- cWW-cWW-cWW-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
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