Motif IL_05192.3 Version IL_05192.3 of this group appears in releases 3.91 to 3.94

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name		1		2		3		4		5		6	break		7		8		9		10	1-10	2-9	3-4	4-8	4-9	5-8	6-7
1	IL_7A0S_008	7A0S	0.8287	0	X	LSU rRNA	C	354	G	355	A	356	A	357	C	358	G	359	*	C	303	A	304	A	305	G	306	cWW	ntSH	ncSH				cWW
2	IL_3CUL_001	3CUL	0.0000	0	C	RNA (92-MER)	U	44	A	45	U	46	U	47	G	48	G	49	*	C	22	A	23	G	24	G	25	cWW				cBW	cWW	cWW
3	IL_7A0S_104	7A0S	0.5771	0	Y	5S rRNA	G	51	G	52	G	53	U	54	C	55	G	56	*	C	32	C	33	C	34	C	35	cWW					ncBW	cWW
4	IL_4PHY_006	4PHY	0.9612	1	A+B	RNA (26-MER) + RNA (20-mer)	G	17	A	18	U	19	C	20	A	21	C	22	*	G	30	G	31	A	33	C	34	cWW	cWw		ncWW			cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
CGAACG*CAAG	1
UAUUGG*CAGG	1
GGGUCG*CCCC	1
GAUCAC*GGAAC	1

Non-Watson-Crick part of the motif

Sequence	Counts
GAAC*AA	1
AUUG*AG	1
GGUC*CC	1
AUCA*GAA	1

Release history

Release	3.91	3.92	3.93	3.94
Date	2024-12-04	2025-01-01	2025-01-29	2025-02-26
Status	Updated, 2 parents	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (4)
Basepair signature: cWW-L-R-L-R-L-cWW-L
Heat map statistics: Min 0.58 | Avg 0.65 | Max 0.99

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