Motif IL_05192.6 Version IL_05192.6 of this group appears in releases 4.0 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 3-4 | 4-9 | 5-8 | 6-7 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_7A0S_008 | 7A0S | 0.8287 | 0 | X | LSU rRNA | C | 354 | G | 355 | A | 356 | A | 357 | C | 358 | G | 359 | * | C | 303 | A | 304 | A | 305 | G | 306 | cWW | ntSH | ncSH | cWW | ||
| 2 | IL_3CUL_001 | 3CUL | 0.0000 | 0 | C | RNA (92-MER) | U | 44 | A | 45 | U | 46 | U | 47 | G | 48 | G | 49 | * | C | 22 | A | 23 | G | 24 | G | 25 | cWW | cBW | cWW | cWW | ||
| 3 | IL_7A0S_104 | 7A0S | 0.5771 | 0 | Y | 5S rRNA | G | 51 | G | 52 | G | 53 | U | 54 | C | 55 | G | 56 | * | C | 32 | C | 33 | C | 34 | C | 35 | cWW | ncBW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGAACG*CAAG | 1 |
| UAUUGG*CAGG | 1 |
| GGGUCG*CCCC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAAC*AA | 1 |
| AUUG*AG | 1 |
| GGUC*CC | 1 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
| Status | Updated, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Heat map statistics
- Min 0.58 | Avg 0.50 | Max 0.85
Coloring options: