Motif IL_05435.1 Version IL_05435.1 of this group appears in releases 3.88 to 3.88
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 1-6 | 2-5 | 3-4 | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_2O3X_004 | 2O3X | 0.0000 | 0 | A+B | RNA (23-mer) | G | 19 | U | 20 | C | 21 | * | G | 28 | U | 29 | C | 30 | cWW | cWw | cWW |
2 | IL_1L9A_009 | 1L9A | 0.2033 | 0 | B | signal recognition particle RNA S domain | G | 120 | U | 121 | U | 122 | * | A | 228 | U | 229 | C | 230 | cWW | ncWw | ncWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
GUC*GUC | 1 |
GUU*AUC | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
U*U | 2 |
Release history
Release | 3.88 |
---|---|
Date | 2024-09-11 |
Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-cWW
- Heat map statistics
- Min 0.20 | Avg 0.10 | Max 0.20
Coloring options: