#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2break 3 4 51-52-3
1 IL_1S72_0161S720.000040 LSU rRNAU548G553*C606G607A608cWWcWW
2 IL_1S72_0171S721.637310 LSU rRNAG554U555*A602A603C605cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
UACAAG*CGA1
GU*AAGC1
Non-Watson-Crick part of the motif
SequenceCounts
ACAA*G1
*AG1

Release history

Release0.20.3
Date2011-12-082011-12-08
StatusNew id, 2 parentsExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_06149.1Only in the parent motif
IL_61940.1
Compare
IL_1S72_016IL_1S72_017
IL_04151.1
Compare
IL_1S72_017IL_1S72_016

Children motifs

Child motifCommon motif instancesOnly in IL_06149.1Only in the child motif
IL_89283.1
Compare
IL_1S72_016IL_1S72_017
IL_96669.1
Compare
IL_1S72_017IL_1S72_016
Annotations
  • (2)
  • Basepair signature
    Heat map statistics
    Min 1.64 | Avg 0.82 | Max 1.64
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