Motif IL_06149.1 Version IL_06149.1 of this group appears in releases 0.2 to 0.3
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 5 | 1-5 | 2-3 | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_1S72_016 | 1S72 | 0.0000 | 4 | 0 | LSU rRNA | U | 548 | G | 553 | * | C | 606 | G | 607 | A | 608 | cWW | cWW |
2 | IL_1S72_017 | 1S72 | 1.6373 | 1 | 0 | LSU rRNA | G | 554 | U | 555 | * | A | 602 | A | 603 | C | 605 | cWW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
UACAAG*CGA | 1 |
GU*AAGC | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
ACAA*G | 1 |
*AG | 1 |
Release history
Parent motifs
Parent motif | Common motif instances | Only in IL_06149.1 | Only in the parent motif |
---|---|---|---|
IL_61940.1 Compare | IL_1S72_016 | IL_1S72_017 | |
IL_04151.1 Compare | IL_1S72_017 | IL_1S72_016 |
Children motifs
Child motif | Common motif instances | Only in IL_06149.1 | Only in the child motif |
---|---|---|---|
IL_89283.1 Compare | IL_1S72_016 | IL_1S72_017 | |
IL_96669.1 Compare | IL_1S72_017 | IL_1S72_016 |
Coloring options: