Motif IL_06306.1 Version IL_06306.1 of this group appears in releases 0.6 to 1.18

Download

Csv

Json

Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Annotation	Chain(s)	Standardized name		1		2		3		4	break		5		6		7		8		9		10		11		12		13	1-13	2-12	3-10	4-5	9-10
1	IL_3U5F_037	3U5F	0	1		6	18S rRNA	U	649	U	650	G	652	C	653	*	G	677	A	678	U	679	U	680	U	681	C	682	C	683	A	684	A	685	cWW	ncWW	ncWS	cWW	ncSH

3D structures

Complete motif including flanking bases

Sequence	Counts
UUGGC*GAUUUCCAA	1

Non-Watson-Crick part of the motif

Sequence	Counts
UGG*AUUUCCA	1

Release history

Release	0.6	0.7	0.8	0.9	0.10	0.11	0.12	1.0	1.1	1.2	1.3	1.4	1.5	1.6	1.7	1.8	1.9	1.10	1.11	1.12	1.13	1.14	1.15	1.17	1.18
Date	2012-04-02	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-03-04	2013-04-08	2013-05-04	2013-06-01	2013-07-01	2013-08-03	2013-08-31	2013-09-28	2013-11-05	2013-12-07	2014-01-04	2014-02-01	2014-03-01	2014-03-29	2014-04-27	2014-06-20	2014-09-04	2014-10-07
Status	New id, no parents	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations
Basepair signature: cWW-L-R-R-R-R-R-R-R-L-cWW
Heat map statistics: Min 0.00 | Avg 0.00 | Max 0.00

Help

Coloring options: Nucleotide numbers

Copyright 2024 BGSU RNA group. Page generated in 0.1989 s