Internal Loop Motif Atlas Release 1.9

#	Motif	Num Nts	Instances
1	IL_97217.9 View exemplar Basepair signature: cWW-cWW History status: Updated, 1 parent Single bulged A (17) Single bulged U (16) Single bulged C (7) Single bulged G (7) Multiple bulged bases (6) Major groove outside cWW, minor groove, intercalation pocket (2)	4	247
2	IL_47174.8 View exemplar Basepair signature: cWW-cWW-cWW History status: Exact match Isolated non-canonical cWW with bulges (6) CA cWW (3) UU cWW (3) Decoding loop with one bulged A (1) UU cWW water inserted (1) CC cWW (1)	6	205
3	IL_39199.4 View exemplar Basepair signature: cWW-tHS-cSH-cWW History status: Exact match Major groove platform (6) Major groove platform; stack outside cWW (2)	5	53
4	IL_41766.5 View exemplar Basepair signature: cWW-cWW-cWW-cWW History status: Updated, 1 parent Tandem non-canonical cWW pairs (15)	8	52
5	IL_56465.3 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Decoding loop related (3) Stack and bulge (1) Single stack bend (1)	5	46
6	IL_44540.4 View exemplar Basepair signature: cWW-cSH-tHS-cWW History status: Exact match Minor groove platform (8)	5	43
7	IL_87904.5 View exemplar Basepair signature: cWW-tSH-tSH-tHS-cWW History status: Exact match Triple sheared (7) AAA cross-strand stack (1)	10	31
8	IL_82444.1 View exemplar Basepair signature: cWW-cWH-cWW History status: Exact match Isolated cWH basepair (9)	6	29
9	IL_13959.4 View exemplar Basepair signature: cWW-tSH-tHS-cWW History status: Exact match Double sheared (4) Decoding loop related (1)	8	26
10	IL_28947.2 View exemplar Basepair signature: cWW-cWW History status: Updated, 2 parents Multiple bulged bases (3) Basepair outside cWW (2) Stack outside cWW (1) Single bulged C (1)	4	22
11	IL_65553.7 View exemplar Basepair signature: cWW-cSS-tSS-L-tSH-tSS-tHS-tHW-cWW-tHS-cWW History status: Exact match Kink-turn (7) Kink-turn with non-sequential stacking (1)	12	22
12	IL_73276.5 View exemplar Basepair signature: cWW-tSW-tWH-cSH-cWS-cWW History status: Exact match C-loop (4)	7	22
13	IL_93424.4 View exemplar Basepair signature: cWW-tSH-R-tHW-cWW History status: Exact match UAA/GAN (2)	9	21
14	IL_55938.4 View exemplar Basepair signature: cWW-cSH-cWW-cWW History status: Exact match Isolated basepair with bulged bases (1)	7	18
15	IL_92027.3 View exemplar Basepair signature: cWW-cSW-cWW History status: Exact match Major groove outside cWW, minor groove, intercalation pocket (3) Major groove minor groove platform; mini C-loop (2)	6	17
16	IL_94430.5 View exemplar Basepair signature: cWW-cWS-cWW History status: Exact match	5	16
17	IL_85647.3 View exemplar Basepair signature: cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW History status: Exact match 8x7 Sarcin-Ricin; G-bulge (5)	15	16
18	IL_24982.5 View exemplar Basepair signature: cWW-tSH-tHW-tHS-cWW History status: Exact match 5x5 Sarcin-Ricin with intercalated A; G-bulge (1) tSH-tHW-tHS (1)	10	16
19	IL_92109.2 View exemplar Basepair signature: cWW-cWW History status: Exact match Single bulged C (1) Multiple bulged bases (1)	4	15
20	IL_49493.4 View exemplar Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-cWW History status: Exact match 7x6 Sarcin-Ricin; G-bulge (1) Sarcin-Ricin target in LSU H95; G-bulge (1)	13	13
21	IL_31555.4 View exemplar Basepair signature: cWW-cWW-tSH-tHS-cWW History status: Exact match Tandem non-canonical cWW pairs (2) UAA/GAN related (1) UAA/GAN variation (1)	9	13
22	IL_46648.5 View exemplar Basepair signature: cWW-tSH-cWW History status: Updated, 1 parent Single stack bend (1) Minor groove platform (1)	5	12
23	IL_43124.2 View exemplar Basepair signature: cWW-cSH-tHS-cWW History status: Exact match Major groove platform with extra pair (2)	7	11
24	IL_37104.2 View exemplar Basepair signature: cWW-tHS-cWW History status: Exact match Isolated tHS basepair with bulges (2)	6	11
25	IL_17212.1 View exemplar Basepair signature: cWW-cSW-cWW History status: Exact match Isolated near basepair (1)	6	10
26	IL_58291.4 View exemplar Basepair signature: cWW-L-L-cWW History status: Exact match	6	10
27	IL_24546.4 View exemplar Basepair signature: cWW-L-L-L-cSH-L-cWW History status: Exact match	10	10
28	IL_90459.3 View exemplar Basepair signature: cWW-cWW-cWW History status: Exact match	6	9
29	IL_02809.3 View exemplar Basepair signature: cWW-cWW-cWW-cWW History status: Exact match Tandem non-canonical cWW pairs (3) Pseudoknot (2)	8	9
30	IL_47444.3 View exemplar Basepair signature: cWW-tSH-tWH-tHW-tHS-cWW-cWW History status: Exact match tSH-tHW-tHS-cWW (2) Other IL (1)	12	9
31	IL_92114.3 View exemplar Basepair signature: cWW-cSH-tHW-L-cWW History status: Exact match Receptor of 11-nt loop-receptor motif (4)	9	9
32	IL_92321.4 View exemplar Basepair signature: cWW-cWW-tSH-tHS-tHS-cWW History status: Exact match	12	7
33	IL_83451.3 View exemplar Basepair signature: cWW-cWW-cSW-cWW-cSH-cWW History status: Exact match	9	7
34	IL_73000.2 View exemplar Basepair signature: cWW-cSW-cSH-cWW History status: Exact match Minor groove platform (1)	6	7
35	IL_97057.3 View exemplar Basepair signature: cWW-cWW-tWH-L-tHS-cWW History status: Exact match	11	6
36	IL_90133.3 View exemplar Basepair signature: cWW-bif-tSH-cWW History status: Exact match	7	6
37	IL_70237.3 View exemplar Basepair signature: cWW-L-L-cWS-tSW-R-R-cWW History status: Exact match	10	6
38	IL_08926.3 View exemplar Basepair signature: cWW-cHH-cWW History status: Exact match	5	6
39	IL_25230.3 View exemplar Basepair signature: cWW-tSH-tHW-bif-L-R-bif-tWH-tHS-cWW History status: Exact match Bacterial 5S Loop E (4)	18	6
40	IL_53635.3 View exemplar Basepair signature: cWW-R-tHW-tHW-tWW-cWW History status: Exact match tHW-tHW cross-strand stack (1)	11	6
41	IL_13069.3 View exemplar Basepair signature: cWW-cWW History status: Exact match	4	6
42	IL_25300.2 View exemplar Basepair signature: cWW-cWW History status: Updated, 2 parents Single bulged A (1)	4	6
43	IL_77263.2 View exemplar Basepair signature: cWW-tSS-L-tSH-tHS-cWW History status: Exact match Kink-turn from U4 (3)	10	6
44	IL_39585.1 View exemplar Basepair signature: cWW-tSH-tWH-tSH-tHS-cWW History status: Exact match	10	6
45	IL_72158.3 View exemplar Basepair signature: cWW-tSH-tSH-tHH-tHS-cWW History status: Exact match	12	6
46	IL_25380.1 View exemplar Basepair signature: cWW-cWW-cSH-R-cWW History status: Exact match Major groove minor groove platform with extra cWW (1)	8	6
47	IL_05684.1 View exemplar Basepair signature: cWW-L-R-tHS-cWW History status: Exact match	8	5
48	IL_02359.3 View exemplar Basepair signature: cWW-tSS-tHH-cSW-bif-tSH-tWH-R-R-tHS-cWW History status: Exact match	16	5
49	IL_71288.1 View exemplar Basepair signature: cWW-cSW-R-cWW History status: Exact match	7	5
50	IL_44067.4 View exemplar Basepair signature: cWW-L-R-tSH-tSH-tHS-cWW-cWW History status: Exact match	14	5
51	IL_79083.3 View exemplar Basepair signature: cWW-tSH-L-R-L-tHH-cWW History status: Exact match	11	5
52	IL_86357.3 View exemplar Basepair signature: cWW-tWW-cWW History status: Exact match	6	5
53	IL_28572.2 View exemplar Basepair signature: cWW-R-R-tWH-cSW-L-R-R-L-tHS-cWW History status: Exact match	15	4
54	IL_01080.1 View exemplar Basepair signature: cWW-R-cWW History status: Exact match	7	4
55	IL_38807.3 View exemplar Basepair signature: cWW-tWH-L-tHW-cSH-cWW History status: Exact match	11	4
56	IL_47758.2 View exemplar Basepair signature: cWW-cHW-cWW-cWW History status: Exact match	8	4
57	IL_48918.3 View exemplar Basepair signature: cWW-tSH-tSH-tHS-tSS-R-cWW History status: Updated, 1 parent Kink-turn (1)	12	4
58	IL_93568.2 View exemplar Basepair signature: cWW-tSH-tHS-L-R-R-L-cWW History status: Exact match	12	4
59	IL_94403.5 View exemplar Basepair signature: cWW-L-L-tWH-L-L-L-cWW History status: Updated, 2 parents	11	4
60	IL_34363.2 View exemplar Basepair signature: cWW-cSS-tSS-L-tSH-tSS-L-R-R-L-cWW History status: Exact match	13	4
61	IL_42251.1 View exemplar Basepair signature: cWW-L-cSH-cWW History status: Exact match Major groove platform with intercalated tWH (1)	6	4
62	IL_22732.1 View exemplar Basepair signature: cWW-tSH-tWH-tHS-cWW History status: Exact match tSH-tHW (1)	9	4
63	IL_39526.4 View exemplar Basepair signature: cWW-L-L-L-L-L-cWW History status: Exact match	9	4
64	IL_82188.2 View exemplar Basepair signature: cWW-tSH-L-R-R-R-R-L-L-L-cWW History status: Exact match	14	4
65	IL_39980.1 View exemplar Basepair signature: cWW-L-cSH-cWW History status: Exact match	6	4
66	IL_31066.3 View exemplar Basepair signature: cWW-R-cWW History status: Exact match	5	4
67	IL_09530.1 View exemplar Basepair signature: cWW-cWH-L-R-cWW History status: Exact match cWH basepair and non-canonical AC (2)	8	4
68	IL_15709.1 View exemplar Basepair signature: cWW-L-R-cWW History status: Exact match	6	4
69	IL_95652.3 View exemplar Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-L-cWW History status: Exact match	14	4
70	IL_98591.3 View exemplar Basepair signature: cWW-cSS-R-tSS-tWW-tHH-tHS-cWW History status: Exact match	13	4
71	IL_21333.2 View exemplar Basepair signature: cWW-tWH-tHS-cWW History status: Exact match	8	4
72	IL_31663.1 View exemplar Basepair signature: cWW-cWW-L-cWW History status: Exact match	7	4
73	IL_45262.4 View exemplar Basepair signature: cWW-L-L-L-tHS-cWW History status: Exact match	9	4
74	IL_87065.1 View exemplar Basepair signature: cWW-cSH-cWW History status: Exact match	5	3
75	IL_16415.2 View exemplar Basepair signature: cWW-L-R-tSH-tWH-tHS-tSS-tSS-R-cWW History status: Exact match	14	3
76	IL_07300.2 View exemplar Basepair signature: cWW-cSH-L-cWW-cWW History status: Exact match	9	3
77	IL_46034.2 View exemplar Basepair signature: cWW-R-R-tHS-cWW History status: Updated, 2 parents	8	3
78	IL_75447.1 View exemplar Basepair signature: cWW-cWW-cWW History status: Exact match	6	3
79	IL_62499.7 View exemplar Basepair signature: cWW-cSS-L-R-R-cWW History status: Exact match	7	3
80	IL_80494.2 View exemplar Basepair signature: cWW-tWH-L-R-tHS-bif-cWW History status: Exact match	12	3
81	IL_05723.1 View exemplar Basepair signature: cWW-R-cSH-tWH-tHS-cWW History status: Exact match	10	3
82	IL_25271.2 View exemplar Basepair signature: cWW-cWW-tWH-tWH-tHW-tHW-cWW History status: Exact match	14	3
83	IL_06180.1 View exemplar Basepair signature: cWW-R-tWH-tHS-cWW History status: Exact match	9	3
84	IL_09348.6 View exemplar Basepair signature: cWW-L-cWW-cWW History status: Updated, 2 parents	7	3
85	IL_34628.2 View exemplar Basepair signature: cWW-tSS-L-tSH-tHS-cWW-cWW History status: Exact match Kink-turn (1)	12	3
86	IL_06211.2 View exemplar Basepair signature: cWW-L-tSS-cWW History status: Updated, 2 parents	7	3
87	IL_35043.1 View exemplar Basepair signature: cWW-R-cWH-R-R-R-cWW History status: Exact match	10	3
88	IL_30840.2 View exemplar Basepair signature: cWW-cWW-L-cWW-cWW-cWW History status: Exact match	11	3
89	IL_37053.1 View exemplar Basepair signature: cWW-tSH-tSH-tHS-tSS-L-R-cWW History status: Exact match	12	3
90	IL_98421.4 View exemplar Basepair signature: cWW-L-L-L-cWW History status: Exact match	7	3
91	IL_43946.1 View exemplar Basepair signature: cWW-tSH-tSS-tSS-R-R-R-R-cWW History status: Exact match Kink-turn (2)	12	3
92	IL_58586.2 View exemplar Basepair signature: cWW-R-R-cWW History status: Exact match	6	3
93	IL_89028.6 View exemplar Basepair signature: cWW-L-tSS-cHW-L-L-cSH-L-cWW History status: Exact match	13	3
94	IL_82563.1 View exemplar Basepair signature: cWW-R-tWH-R-R-R-cWW History status: Exact match	10	3
95	IL_52173.1 View exemplar Basepair signature: cWW-L-R-R-R-L-cWW History status: Exact match	9	3
96	IL_79955.2 View exemplar Basepair signature: cWW-cWW-cWW-cWW-cSW-cWW History status: Exact match	12	3
97	IL_16166.4 View exemplar Basepair signature: cWW-R-cWW History status: Exact match Basepair outside cWW, intercalation pocket (1)	5	3
98	IL_28003.1 View exemplar Basepair signature: cWW-tWH-cSH-cWW History status: New id, 2 parents Receptor of 11-nt loop-receptor motif (2)	8	3
99	IL_74876.2 View exemplar Basepair signature: cWW-tWH-L-R-tHS-cWW History status: Exact match	10	3
100	IL_96206.2 View exemplar Basepair signature: cWW-cSS-R-cWW History status: Updated, 2 parents 180 degree turn (1)	5	3
101	IL_16330.1 View exemplar Basepair signature: cWW-cWW-L-R-R-R-R-R-R-R-R-R-L-L-L-L-L-tHH-tHS-cWW History status: Exact match	25	2
102	IL_69536.1 View exemplar Basepair signature: cWW-tSH-R-R-cWW History status: Exact match	8	2
103	IL_31707.1 View exemplar Basepair signature: cWW-L-L-L-cWW-L-bif-cWW History status: Exact match Vitamin B12 Aptamer (1)	11	2
104	IL_45794.1 View exemplar Basepair signature: cWW-L-R-R-tWW-tWW-cWW History status: Exact match	11	2
105	IL_11751.1 View exemplar Basepair signature: cWW-L-L-L-cWW History status: Exact match	7	2
106	IL_80348.2 View exemplar Basepair signature: cWW-R-cWW History status: Updated, 1 parent	5	2
107	IL_52940.1 View exemplar Basepair signature: cWW-L-R-R-R-R-L-L-L-tWW-cWW History status: Exact match	14	2
108	IL_21495.1 View exemplar Basepair signature: cWW-L-R-R-R-tHW-tHW-bif-cWW History status: Exact match	14	2
109	IL_87507.1 View exemplar Basepair signature: cWW-L-R-L-tHS-cWW History status: Exact match	9	2
110	IL_21639.1 View exemplar Basepair signature: cWW-L-tWH-R-R-R-cWW History status: Exact match	9	2
111	IL_33964.1 View exemplar Basepair signature: cWW-tWW-L-tWH-R-R-R-R-R-R-R-tHH-tHS-cWW History status: Exact match	20	2
112	IL_76095.3 View exemplar Basepair signature: cWW-cWW-tSH-R-tHW-tHW-tWH-L-cWW-cWW History status: Exact match	18	2
113	IL_12211.1 View exemplar Basepair signature: cWW-L-R-R-R-L-L-cWW-cWW History status: Exact match	12	2
114	IL_90735.1 View exemplar Basepair signature: cWW-cWW-L-R-R-R-R-L-L-L-L-L-cWW History status: Exact match	16	2
115	IL_22358.1 View exemplar Basepair signature: cWW-L-R-R-R-cWW History status: New id, 2 parents	8	2
116	IL_46435.1 View exemplar Basepair signature: cWW-L-L-L-L-L-L-L-L-L-cWW History status: Exact match	13	2
117	IL_57785.5 View exemplar Basepair signature: cWW-cSW-tHS-cWW History status: Exact match	8	2
118	IL_87548.1 View exemplar Basepair signature: cWW-tSH-tHW-L-cSH-R-cWW History status: Exact match	11	2
119	IL_97509.1 View exemplar Basepair signature: cWW-cWW-L-R-R-L-cWW History status: Exact match	10	2
120	IL_39355.1 View exemplar Basepair signature: cWW-L-R-L-L-cWW History status: Exact match	8	2
121	IL_85015.1 View exemplar Basepair signature: cWW-R-R-tHS-cWW History status: Exact match	8	2
122	IL_77076.1 View exemplar Basepair signature: cWW-tSH-tSS-tSS-tWH-tWH-R-R-R-R-R-R-cWW History status: Exact match	18	2
123	IL_97833.1 View exemplar Basepair signature: cWW-cSW-tSH-tWH-tHW-tHS-cWW-cWW History status: Exact match tSH-tHW-tHS with extra cWW pairs (1)	14	2
124	IL_65137.1 View exemplar Basepair signature: cWW-L-cSS-tWH-tHW-L-cWW-cWW History status: Exact match	12	2
125	IL_30381.1 View exemplar Basepair signature: cWW-cWW-L-R-cWW History status: Exact match Tandem non-canonical cWW pairs (1)	8	2
126	IL_94744.1 View exemplar Basepair signature: cWW-cWW-L-R-tSH-tHH-cSH-tWH-tHS-cWW History status: Exact match 9x8 Sarcin-Ricin with GA cWW pair; G-bulge (1)	17	2
127	IL_50521.1 View exemplar Basepair signature: cWW-tSH-cWH-tWH-tSS-tHW-L-cWW History status: Exact match	14	2
128	IL_19898.1 View exemplar Basepair signature: cWW-L-R-R-cWW History status: Exact match	7	2
129	IL_09520.3 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Updated, 1 parent	7	2
130	IL_23262.4 View exemplar Basepair signature: cWW-R-R-R-tSW-L-cWW History status: Exact match	10	2
131	IL_95150.5 View exemplar Basepair signature: cWW-cHW-tHS-cWW History status: Updated, 1 parent	7	2
132	IL_23414.1 View exemplar Basepair signature: cWW-L-R-R-R-cSH-R-bif-tWH-R-R-R-R-R-L-cWW History status: Exact match	21	2
133	IL_78744.1 View exemplar Basepair signature: cWW-tSH-tSH-tHS-tHS-cWW History status: Exact match Quadruple sheared (1)	12	2
134	IL_98566.1 View exemplar Basepair signature: cWW-L-R-R-R-cWW History status: Exact match	8	2
135	IL_51403.1 View exemplar Basepair signature: cWW-L-R-R-L-L-L-cWW History status: New id, 2 parents	10	2
136	IL_67887.1 View exemplar Basepair signature: cWW-tSH-cWW History status: Exact match Minor groove platform (1)	5	2
137	IL_09587.1 View exemplar Basepair signature: cWW-cWW-L-R-R-L-L-cWW History status: Exact match	11	2
138	IL_37197.1 View exemplar Basepair signature: cWW-L-L-L-tHS-cWW-cWW History status: Exact match	11	2
139	IL_47475.1 View exemplar Basepair signature: cWW-cWW History status: New id, 1 parent	4	2
140	IL_15840.2 View exemplar Basepair signature: cWW-tSH-tSH-L-R-L-cWW History status: Exact match	11	2
141	IL_74214.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match	5	2
142	IL_09882.1 View exemplar Basepair signature: cWW-tSH-tHW-tWH-tHS-cWW History status: Exact match tSH-tHW-tWH-tHS (2)	12	2
143	IL_90057.1 View exemplar Basepair signature: cWW-tSS-L-L-cSS-tWH-tSW-cWS-cSS-tWS-cSH-cWH-cHW-cSH-R-R-cWW History status: Exact match	23	2
144	IL_40892.1 View exemplar Basepair signature: cWW-L-L-L-L-cWW History status: Exact match	8	2
145	IL_68880.1 View exemplar Basepair signature: cWW-R-cWH-L-L-L-cWW History status: Exact match	9	2
146	IL_00998.1 View exemplar Basepair signature: cWW-R-R-tHS-cWW History status: Exact match	8	2
147	IL_37406.1 View exemplar Basepair signature: cWW-R-R-R-cWW History status: Exact match	7	2
148	IL_80093.1 View exemplar Basepair signature: cWW-L-R-tHH-tHS-cWW History status: Exact match	10	2
149	IL_05513.1 View exemplar Basepair signature: cWW-L-L-L-tWH-L-L-L-cWW History status: Exact match	12	1
150	IL_41139.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match	7	1
151	IL_52610.1 View exemplar Basepair signature: cWW-tSS-tSH-L-L-L-L-cWW-L-L-L-L-L-L-L-L-cSS-L-L-L-cSW-cWW-L-cWW-R-tSH-R-R-R-R History status: Exact match	36	1
152	IL_83250.1 View exemplar Basepair signature: cWW-tWH-R-R-R-cSH-cWW-cWW History status: Exact match	11	1
153	IL_06847.1 View exemplar Basepair signature: cWW-R-cSW-R-R-tHS-cWW History status: Exact match	11	1
154	IL_21421.1 View exemplar Basepair signature: cWW-L-R-tSH-tSS-tSS-tWH-tSH-R-R-R-R-R-R-cWW History status: Exact match	20	1
155	IL_75415.1 View exemplar Basepair signature: cWW-L-L-L-L-L-L-cWW History status: Exact match	10	1
156	IL_25082.1 View exemplar Basepair signature: cWW-L-R-R-L-L-tSH-tSS-cWW-cWW-cWW History status: Exact match	17	1
157	IL_61730.1 View exemplar Basepair signature: cWW-L-R-L-tHW-L-L-cWW History status: Exact match	11	1
158	IL_28644.1 View exemplar Basepair signature: cWW-R-cWW History status: Exact match	5	1
159	IL_41153.1 View exemplar Basepair signature: cWW-bif-L-cWW History status: Exact match	7	1
160	IL_69799.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match	5	1
161	IL_31754.1 View exemplar Basepair signature: cWW-cSW-tHW-cSH-tWH-tHS-cWW History status: Exact match	13	1
162	IL_56513.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match	5	1
163	IL_97191.1 View exemplar Basepair signature: cWW-cWW-tHH-cSH-tWH-tHS-cWW History status: Exact match 7x6 Sarcin-Ricin with UU cWW pair; G-bulge (1)	13	1
164	IL_11778.1 View exemplar Basepair signature: cWW-R-R-R-cWW History status: Exact match	7	1
165	IL_25181.1 View exemplar Basepair signature: cWW-cWW-L-R-R-tHW-bif-cWW History status: Exact match	13	1
166	IL_52958.1 View exemplar Basepair signature: cWW-L-R-R-L-L-cWW History status: Exact match	9	1
167	IL_83856.1 View exemplar Basepair signature: cWW-cWW-tWW-tHS-cWW-cWW History status: Exact match	12	1
168	IL_46306.1 View exemplar Basepair signature: cWW-L-R-R-cWW-cWW History status: Exact match	9	1
169	IL_57364.1 View exemplar Basepair signature: cWW-tSH-cWW-R-cWW History status: Exact match	8	1
170	IL_87523.1 View exemplar Basepair signature: cWW-R-R-R-R-tHS-cWW History status: Exact match	10	1
171	IL_39324.1 View exemplar Basepair signature: cWW-tSS-tHH-cSW-bif-tSH-tWH-R-R-tHS-cWW-cWW History status: Exact match	18	1
172	IL_63952.1 View exemplar Basepair signature: cWW-L-R-R-tHW-tHW-L-R-cWW History status: Exact match	13	1
173	IL_80505.1 View exemplar Basepair signature: cWW-L-R-R-R-R-R-R-cWW History status: Exact match	11	1
174	IL_06177.1 View exemplar Basepair signature: cWW-L-R-cWW History status: Exact match	6	1
175	IL_17603.1 View exemplar Basepair signature: cWW-tSH-R-tHH-tHS-cWW History status: Exact match	11	1
176	IL_30067.1 View exemplar Basepair signature: cWW-R-bif-tHW-tHS-cWW History status: Exact match	10	1
177	IL_41791.1 View exemplar Basepair signature: cWW-tSW-tWH-tSW-cSH-cWS-R-R-cWW-cWW History status: Exact match	11	1
178	IL_53323.1 View exemplar Basepair signature: cWW-L-R-R-L-cWW-cWW History status: Exact match	10	1
179	IL_83920.1 View exemplar Basepair signature: cWW-cWW-L-cWW History status: Exact match	7	1
180	IL_09333.1 View exemplar Basepair signature: cWW-tWH-tWH-tHW-tHW-cWW History status: Exact match	12	1
181	IL_76486.1 View exemplar Basepair signature: cWW-tSH-tSW-tHH-cSH-tWH-tHS-cWW History status: Exact match	15	1
182	IL_02835.1 View exemplar Basepair signature: cWW-L-L-L-L-L-tHH-tHS-cWW History status: Exact match	13	1
183	IL_12507.1 View exemplar Basepair signature: cWW-cSS-cSS-R-R-L-L-L-cWW History status: Exact match	11	1
184	IL_49527.1 View exemplar Basepair signature: cWW-R-R-cWW-cWW-cWW History status: Exact match	10	1
185	IL_64589.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match	7	1
186	IL_80652.1 View exemplar Basepair signature: cWW-R-cSH-tWH-tSH-tHS-cWW History status: Exact match	13	1
187	IL_91044.1 View exemplar Basepair signature: cWW-L-R-tHW-cWW History status: Exact match	8	1
188	IL_17682.1 View exemplar Basepair signature: cWW-L-R-tSH-tHW-cSH-tHH-tHS-cWW-cWW History status: Exact match	17	1
189	IL_30354.1 View exemplar Basepair signature: cWW-R-R-cWW History status: Exact match	6	1
190	IL_71685.1 View exemplar Basepair signature: cWW-cWW-bif-R-cSH-tWH-tHS-cWW History status: Exact match	14	1
191	IL_57977.1 View exemplar Basepair signature: cWW-tSH-L-R-L-tHS-cWW History status: Exact match	11	1
192	IL_02897.1 View exemplar Basepair signature: cWW-L-R-cWW-L-L-tSW-L-cWW History status: Exact match	13	1
193	IL_49976.1 View exemplar Basepair signature: cWW-tSS-cSS-L-cSS-R-L-cWW History status: Exact match	8	1
194	IL_81398.1 View exemplar Basepair signature: cWW-L-R-cWW-cWW-cWW History status: Exact match	10	1
195	IL_91078.1 View exemplar Basepair signature: cWW-tSW-L-R-R-L-tWS-cWW History status: Exact match	12	1
196	IL_18675.1 View exemplar Basepair signature: cWW-R-R-R-cWW History status: Exact match	7	1
197	IL_53988.1 View exemplar Basepair signature: cWW-cSW-L-L-tHS-cWS-cWW History status: Exact match	12	1
198	IL_71942.1 View exemplar Basepair signature: cWW-L-L-L-L-L-L-cWW History status: Exact match	10	1
199	IL_85510.1 View exemplar Basepair signature: cWW-L-L-cWW History status: Exact match	6	1
200	IL_09491.1 View exemplar Basepair signature: cWW-L-L-L-cWW History status: Exact match	7	1
201	IL_22909.1 View exemplar Basepair signature: cWW-L-cSH-R-R-R-cWW History status: New id, 1 parent	9	1
202	IL_46721.1 View exemplar Basepair signature: cWW-R-R-R-tSW-L-cWW History status: Exact match	10	1
203	IL_88119.1 View exemplar Basepair signature: cWW-cSH-R-cWW History status: Exact match	6	1
204	IL_97842.1 View exemplar Basepair signature: cWW-R-R-R-R-cWS-cWW-cWW-L-R-cWW History status: Exact match	16	1
205	IL_02957.1 View exemplar Basepair signature: cWW-R-R-cWW-tSS-cWW-cWW-L-L-L-L-L-L-L-cWW-cSS-cSS-L-cWW-cWW History status: Exact match	26	1
206	IL_25307.1 View exemplar Basepair signature: cWW-tHH-L-R-L-cWW History status: Exact match	9	1
207	IL_91089.1 View exemplar Basepair signature: cWW-L-L-L-L-cWW History status: Exact match	8	1
208	IL_06306.1 View exemplar Basepair signature: cWW-L-R-R-R-R-R-R-R-L-cWW History status: Exact match	13	1
209	IL_43316.1 View exemplar Basepair signature: cWW-tSH-L-L-tHH-cWW History status: Exact match	10	1
210	IL_54450.1 View exemplar Basepair signature: cWW-L-R-cWW-cWW History status: Exact match	8	1
211	IL_94973.1 View exemplar Basepair signature: cWW-L-R-L-tHH-cSH-tWH-tHS-cWW History status: Exact match	14	1
212	IL_58454.1 View exemplar Basepair signature: cWW-tSH-L-R-R-cWW History status: Exact match	9	1
213	IL_77296.1 View exemplar Basepair signature: cWW-R-R-R-R-R-R-R-R-R-R-cWW History status: Exact match	14	1
214	IL_88367.1 View exemplar Basepair signature: cWW-bif-R-cSH-tWH-tHS-L-R-tSH-cWW History status: Exact match	15	1
215	IL_03110.1 View exemplar Basepair signature: cWW-tSH-L-L-L-tHS-cWW-cWW History status: Exact match	13	1
216	IL_15205.1 View exemplar Basepair signature: cWW-cWW-L-cSW-L-tHS-cWW History status: Exact match	12	1
217	IL_50911.1 View exemplar Basepair signature: cWW-L-cWS-cWW History status: Exact match	7	1
218	IL_66744.1 View exemplar Basepair signature: cWW-L-R-R-L-L-L-L-cWW-cWW History status: Exact match	13	1
219	IL_91904.1 View exemplar Basepair signature: cWW-L-R-R-L-L-cSS-L-cWW-cWW History status: Exact match	13	1
220	IL_06421.1 View exemplar Basepair signature: cWW-tHS-tHS-cWW History status: Exact match	7	1
221	IL_20775.1 View exemplar Basepair signature: cWW-R-tHS-cWW History status: Exact match	7	1
222	IL_54470.1 View exemplar Basepair signature: cWW-tHS-tHS-cWW History status: Exact match	8	1
223	IL_85805.1 View exemplar Basepair signature: cWW-L-R-R-R-cWW History status: Exact match	8	1
224	IL_03282.1 View exemplar Basepair signature: cWW-tHW-tHS-cWW-cWW History status: Exact match	10	1
225	IL_26868.1 View exemplar Basepair signature: cWW-tSH-tHW-tWW-cWW History status: Exact match	10	1
226	IL_40527.1 View exemplar Basepair signature: cWW-L-R-tSS-L-tSH-L-R-L-cWW-cWW History status: Exact match	15	1
227	IL_06468.1 View exemplar Basepair signature: cWW-tWH-R-R-R-cWW-cWW History status: Exact match	10	1
228	IL_21077.1 View exemplar Basepair signature: cWW-L-R-R-R-cWW History status: Exact match	8	1
229	IL_31224.1 View exemplar Basepair signature: cWW-L-R-R-cWW History status: Exact match	7	1
230	IL_54954.1 View exemplar Basepair signature: cWW-L-R-tSH-tHW-tHH-tHS-cWW-cWW History status: Exact match	16	1
231	IL_86059.1 View exemplar Basepair signature: cWW-cWW History status: Exact match	4	1
232	IL_23639.1 View exemplar Basepair signature: cWW-tWH-tHS-L-cWW History status: Exact match	9	1
233	IL_59529.1 View exemplar Basepair signature: cWW-tWH-tHH-tHS-cWW History status: Exact match	10	1
234	IL_89794.1 View exemplar Basepair signature: cWW-tSH-tSH-tSS-tSS-R-cWW History status: Exact match	11	1
235	IL_03741.1 View exemplar Basepair signature: cWW-cWW-L-R-R-R-R-R-L-tHS-cWW History status: Exact match	15	1
236	IL_26971.1 View exemplar Basepair signature: cWW-tSH-L-R-R-R-L-cWW History status: Exact match	10	1
237	IL_40845.1 View exemplar Basepair signature: cWW-cSW-cSH-R-cWW History status: Exact match	7	1
238	IL_68767.1 View exemplar Basepair signature: cWW-L-L-cWW History status: Exact match	6	1
239	IL_82601.1 View exemplar Basepair signature: cWW-cWW-cWW-cWW History status: Exact match Tandem non-canonical cWW pairs (1)	8	1
240	IL_06471.1 View exemplar Basepair signature: cWW-cSW-tWH-tSW-cSH-L-cWS-R-cWW History status: Exact match	10	1
241	IL_21254.1 View exemplar Basepair signature: cWW-tWH-cWW-tHS-tSS-R-R-cWW History status: Exact match	12	1
242	IL_55649.1 View exemplar Basepair signature: cWW-tWH-L-R-cWW History status: Exact match	8	1
243	IL_95980.1 View exemplar Basepair signature: cWW-R-R-cWW-cWW History status: Exact match Isolated non-canonical cWW with bulges (1)	8	1
244	IL_37347.1 View exemplar Basepair signature: cWW-cHW-L-tHW-tHW-tHW-bif-cWW History status: Exact match	15	1
245	IL_47687.1 View exemplar Basepair signature: cWW-tWH-tWH-tWH-L-R-L-tWW-cWW History status: Exact match	13	1
246	IL_59934.1 View exemplar Basepair signature: cWW-tSH-tWH-tHS-R-R-cWW History status: Exact match	12	1
247	IL_98655.1 View exemplar Basepair signature: cWW-L-cHW-L-L-tHH-tSW-L-cWW History status: Exact match	13	1
248	IL_05221.1 View exemplar Basepair signature: cWW-cWW-bif-tHW-cWH-tSW-cSH-cWH-cSH-tHS-cWW History status: Exact match	15	1
249	IL_52509.1 View exemplar Basepair signature: cWW-cWW-L-L-tHS-cWW History status: Exact match	10	1
250	IL_82650.1 View exemplar Basepair signature: cWW-cWS-tSH-tHS-L-R-L-cWW History status: Exact match	13	1
251	IL_06808.1 View exemplar Basepair signature: cWW-tSH-tHS-cWW History status: Exact match	8	1
252	IL_86981.1 View exemplar Basepair signature: cWW-bif-tSH-tHW-cSH-tHH-bif-cWW History status: Exact match	15	1
253	IL_11302.1 View exemplar Basepair signature: cWW-L-R-R-tHW-L-cWW History status: Exact match	10	1
254	IL_47732.1 View exemplar Basepair signature: cWW-L-R-cWW History status: Exact match	6	1
255	IL_60649.1 View exemplar Basepair signature: cWW-cSS-L-L-L-tSS-tHW-L-R-cWW History status: Exact match	11	1
256	IL_90086.1 View exemplar Basepair signature: cWW-tWW-L-tWW-L-cWW History status: New id, 1 parent	10	1
257	IL_98924.1 View exemplar Basepair signature: cWW-L-L-L-cWW-cWW History status: Exact match	9	1