IL_06437.1

#S	Loop id	PDB	Disc	#Non-core	Annotation	Chain(s)		1		2		3	break		4		5	1-2	1-5	2-5	3-4
1	IL_4LFB_045	4LFB	0.6777	2	Minor groove platform	A	U	1199	G	1202	C	1203	*	G	1057	G	1058		cWW	tHS	cWW
2	IL_5J7L_048	5J7L	0.6380	2	Minor groove platform	AA	U	1199	U	1202	C	1203	*	G	1057	G	1058		cWW	tHS	cWW
3	IL_5J7L_004	5J7L	0.6173	0	Minor groove platform	AA	C	54	A	55	U	56	*	A	356	G	357		cWW	tHS	cWW
4	IL_4LFB_004	4LFB	0.5951	0	Minor groove platform	A	C	54	A	55	U	56	*	A	356	G	357		cWW	tHS	cWW
5	IL_4V88_388	4V88	0.5539	0	Minor groove platform	A6	C	50	A	51	U	52	*	A	428	G	429		cWW	tHS	cWW
6	IL_4V5O_087	4V5O	0.5006	0	Minor groove platform	BA	C	49	A	50	U	51	*	A	420	G	421		cWW	tHS	cWW
7	IL_4LFB_054	4LFB	0.5991	0	Minor groove platform	A	C	1260	A	1261	C	1262	*	G	1273	G	1274		ncWW	tHS	cWW
8	IL_4UYK_001	4UYK	0.5332	0	Minor groove platform	R	C	122	A	123	C	124	*	G	77	G	78			tHS	cWW
9	IL_4V8P_177	4V8P	0.3833	0	Minor groove platform	D1	C	470	A	471	C	472	*	G	506	G	507		ncWW	ntHS	cWW
10	IL_4V5O_147	4V5O	0.4120	0	Minor groove platform	BA	C	1278	U	1279	G	1280	*	C	1289	G	1290	ncSH	cWW	tHS	cWW
11	IL_4V88_454	4V88	0.4264	0	Minor groove platform	A6	C	1306	U	1307	G	1308	*	C	1317	G	1318	cSH	cWW	tHS	cWW
12	IL_4Y4O_246	4Y4O	0.4928	1	Minor groove platform	2A	G	1846	A	1848	G	1849	*	C	1893	C	1894		cWW	ncWS	cWW
13	IL_5J7L_314	5J7L	0.7019	1	Minor groove platform, major groove intercalation	DA	C	1837	G	1839	G	1840	*	C	1902	G	1903		cWW	ntHS	cWW
14	IL_5T83_003	5T83	0.3193	0	Minor groove platform	A	C	36	U	37	G	38	*	C	21	G	22	ncSH	cWW	ntHS	cWW
15	IL_2QWY_009	2QWY	0.3511	0	Minor groove platform	C	U	40	A	41	G	42	*	C	23	A	24		cWW	tHS	cWW
16	IL_5J7L_042	5J7L	0.4064	0	Minor groove platform	AA	C	1226	A	1227	C	1228	*	G	953	G	954		cWW	ntHS	cWW
17	IL_4LFB_038	4LFB	0.3352	0	Minor groove platform	A	C	1226	A	1227	C	1228	*	G	953	G	954		cWW	ntHS	cWW
18	IL_4V5O_138	4V5O	0.3459	0	Minor groove platform	BA	C	1430	A	1431	C	1432	*	G	1150	G	1151		cWW	ntHS	cWW
19	IL_4WF9_081	4WF9	0.2441	1	Minor groove platform	X	U	2465	C	2467	C	2468	*	G	2097	A	2098	cSH	cWW		cWW
20	IL_4V9F_075	4V9F	0.2278	1	Minor groove platform	0	U	2473	C	2475	C	2476	*	G	2111	A	2112	cSH	cWW		cWW
21	IL_4Y4O_254	4Y4O	0.2045	1	Minor groove platform	2A	U	2438	C	2440	C	2441	*	G	2070	A	2071	cSH	cWW		cWW
22	IL_4IOA_076	4IOA	0.2472	1	Minor groove platform	X	U	2417	C	2419	C	2420	*	G	2053	A	2054	cSH	cWW		cWW
23	IL_4V8P_254	4V8P	0.2567	1	Minor groove platform	D1	U	2795	C	2797	C	2798	*	G	2407	A	2408	cSH	cWW		cWW
24	IL_5J7L_324	5J7L	0.2110	1	Minor groove platform	DA	U	2438	C	2440	U	2441	*	A	2070	A	2071	cSH	cWW		cWW
25	IL_4IOA_027	4IOA	0.1563	0	Minor groove platform	X	U	925	C	926	C	927	*	G	875	A	876	cSH	cWW		cWW
26	IL_4WF9_032	4WF9	0.0841	0	Minor groove platform	X	U	958	C	959	C	960	*	G	907	A	908	cSH	cWW		cWW
27	IL_4V9F_034	4V9F	0.0000	0	Minor groove platform	0	U	1009	C	1010	C	1011	*	G	956	A	957	cSH	cWW		cWW
28	IL_4Y4O_205	4Y4O	0.0813	0	Minor groove platform	2A	U	913	C	914	C	915	*	G	862	A	863	cSH	cWW		cWW
29	IL_1U6B_007	1U6B	0.2731	0	Minor groove platform	B	G	128	A	129	G	130	*	C	177	C	178	cSH	cWW	tHS	cWW
30	IL_1Y0Q_003	1Y0Q	0.2210	0	Minor groove platform	A	A	120	C	121	G	122	*	C	192	U	193		cWW	ntHS	cWW
31	IL_4V88_412	4V88	0.2304	0	Minor groove platform	A6	A	518	C	519	A	520	*	U	532	U	533		cWW	ntHS	cWW
32	IL_4V8P_203	4V8P	0.2578	0	Minor groove platform	D1	U	1076	U	1077	U	1078	*	A	1023	A	1024		cWW	ntHS	cWW
33	IL_5J7L_247	5J7L	0.2018	0	Minor groove platform	DA	U	434	C	435	C	436	*	G	43	A	44	cSH	cWW		cWW
34	IL_4Y4O_181	4Y4O	0.2987	0	Minor groove platform	2A	U	434	C	435	C	436	*	G	42	A	43	cSH	cWW		cWW
35	IL_4IOA_003	4IOA	0.3381	0	Minor groove platform	X	U	447	C	448	C	449	*	G	42	A	43	cSH	cWW		cWW
36	IL_3RW6_001	3RW6	0.4995	1	Minor groove platform	H	U	53	A	55	U	56	*	A	7	A	8	ncSH	cWW		cWW
37	IL_4V8P_286	4V8P	0.3531	0	Minor groove platform	D1	U	3338	C	3339	U	3340	*	A	3281	A	3282		cWW		cWW
38	IL_2GDI_003	2GDI	0.3542	0	Minor groove platform	X	C	23	C	24	U	25	*	A	35	G	36	ncSH	cWW		cWW
39	IL_3K0J_002	3K0J	0.4081	0	Minor groove platform related	E	C	18	C	19	U	20	*	A	35	G	36	ncSH	cWW		cWW
40	IL_5J7L_064	5J7L	0.5779	0	Single bulged A	AA	U	1440	A	1441	G	1442	*	C	1460	G	1461		cWW		cWW
41	IL_3IWN_001	3IWN	0.4821	0	Minor groove platform	A	G	89	A	90	U	91	*	A	2	C	3		ncWW		cWW
42	IL_4R4V_001	4R4V	0.5023	0	Minor groove platform	A	U	777	U	778	A	779	*	U	607	G	608		cWW		cWW
43	IL_4R4V_007	4R4V	0.5023	0	Minor groove platform	A	U	777\|\|\|\|7_556	U	778\|\|\|\|7_556	A	779\|\|\|\|7_556	*	U	607\|\|\|\|7_556	G	608\|\|\|\|7_556		cWW		cWW
44	IL_4V9F_032	4V9F	0.7235	0	Single bulged A	0	U	942	A	943	G	944	*	C	1023	G	1024		cWW		cWW
45	IL_4V88_445	4V88	0.5913	0	Minor groove platform	A6	C	1459	A	1460	C	1461	*	G	1178	G	1179		cWW		cWW
46	IL_4Y4O_209	4Y4O	0.7744	0	Minor groove platform	2A	U	877	A	878	G	879	*	C	898	A	899		cWW		cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
CAC*GG	7
UCC*GA	7
UACC*GA	5
CAU*AG	4
CUG*CG	3
UAG*CA	2
CCU*AG	2
UAG*CG	2
UUA*UG	2
UCAGC*GG	1
UCAUC*GG	1
GAAG*CC	1
CCGG*CG	1
UACU*AA	1
GAG*CC	1
ACG*CU	1
ACA*UU	1
UUU*AA	1
UAAU*AA	1
UCU*AA	1
GAU*AC	1

Non-Watson-Crick part of the motif

Sequence	Counts
A*	17
C*	12
U*	6
AC*	6
AA*	2
CAG*	1
CAU*	1
CG*	1

Release history

Release	3.2
Date	2018-09-26
Status	New id, no parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Motif IL_06437.1 Version IL_06437.1 of this group appears in releases 3.2 to 3.2 Download Csv Json

3D structures

Complete motif including flanking bases

Non-Watson-Crick part of the motif

Release history

Parent motifs

Children motifs

Motif IL_06437.1 Version IL_06437.1 of this group appears in releases 3.2 to 3.2

Download

Csv

Json