Motif IL_07144.1 Version IL_07144.1 of this group appears in releases 3.77 to 3.86
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 6-7 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5WTI_001 | 5WTI | 0.0000 | 0 | Other IL | B | RNA (123-MER) | G | 0 | C | 1 | G | 2 | A | 3 | G | 4 | G | 5 | * | C | 25 | A | 26 | A | 27 | C | 28 | cWW | ncWW | cWW |
| 2 | IL_1NUV_001 | 1NUV | 0.5008 | 0 | A+B | RNA (13-mer) + RNA (11-mer) | C | 22 | C | 23 | G | 24 | A | 25 | G | 26 | C | 27 | * | G | 43 | G | 44 | A | 45 | G | 46 | cWW | ncWW | cWW | |
| 3 | IL_1NUV_003 | 1NUV | 0.5174 | 0 | E+F | RNA (13-mer) + RNA (11-mer) | C | 22 | C | 23 | G | 24 | A | 25 | G | 26 | C | 27 | * | G | 43 | G | 44 | A | 45 | G | 46 | cWW | ncWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCGAGC*GGAG | 2 |
| GCGAGG*CAAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CGAG*GA | 2 |
| CGAG*AA | 1 |
Release history
| Release | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 |
|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2023-12-06 | 2024-01-03 | 2024-01-03 | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 |
| Status | New id, > 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Other IL (1)
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Heat map statistics
- Min 0.44 | Avg 0.32 | Max 0.52
Coloring options: