Motif IL_07931.3 Version IL_07931.3 of this group appears in releases 3.20 to 3.32
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 1-7 | 2-6 | 3-6 | 4-5 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4LFB_064 | 4LFB | 0.6403 | 2 | A | SSU rRNA | C | 1440 | G | 1441 | G | 1442 | G | 1447 | * | C | 1459 | A | 1460 | G | 1461 | cWW | tSH | cWW | |
| 2 | IL_6CZR_136 | 6CZR | 0.0000 | 0 | 1a | SSU rRNA | G | 578 | G | 579 | C | 580 | G | 581 | * | C | 627 | G | 628 | C | 629 | cWW | ntSH | ncWW | cWW |
| 3 | IL_4V84_070 | 4V84 | 0.7040 | 0 | AV | RNA (34-MER) | U | 6180 | C | 6181 | A | 6182 | G | 6183 | * | C | 6194 | G | 6195 | A | 6196 | cWW | ncWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGGGAG*CAG | 1 |
| GGCG*CGC | 1 |
| UCAG*CGA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GGGA*A | 1 |
| GC*G | 1 |
| CA*G | 1 |
Release history
| Release | 3.20 | 3.21 | 3.22 | 3.23 | 3.24 | 3.25 | 3.26 | 3.27 | 3.28 | 3.29 | 3.30 | 3.31 | 3.32 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2019-06-28 | 2019-07-26 | 2019-08-23 | 2019-09-19 | 2019-10-16 | 2019-11-13 | 2019-12-11 | 2020-01-08 | 2020-02-05 | 2020-03-04 | 2020-04-01 | 2020-04-29 | 2020-05-27 |
| Status | Updated, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-tSH-L-cWW
- Heat map statistics
- Min 0.64 | Avg 0.51 | Max 0.93
Coloring options: