Motif IL_08001.1 Version IL_08001.1 of this group appears in releases 3.77 to 3.79
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | break | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 1-18 | 2-17 | 3-16 | 8-14 | 9-12 | 10-11 | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_6CZR_138 | 6CZR | 0.0000 | 0 | tSH-tHW-tHH-tHS | 1a | SSU rRNA | G | 588 | U | 589 | G | 590 | A | 591 | A | 592 | A | 593 | G | 594 | A | 595 | C | 596 | C | 597 | * | G | 611 | G | 612 | G | 613 | G | 614 | G | 615 | A | 616 | G | 617 | C | 618 | ncWW | ncWW | tSH | ncWW | ncWW | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUGAAAGACC*GGGGGAGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGAAAGAC*GGGGAG | 1 |
- Annotations
-
- tSH-tHW-tHH-tHS (1)
- Basepair signature
- cWW-L-R-tSH-L-R-L-R-L-R-L-R-L-L-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: