Motif IL_08380.1 Version IL_08380.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | break | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 24 | 25 | 26 | 1-26 | 2-25 | 9-14 | 10-13 | 11-12 | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5AJ0_086 | 5AJ0 | 0 | 2 | A2 | LSU rRNA | G | 1914 | A | 1915 | C | 1917 | C | 1918 | C | 1919 | A | 1920 | G | 1921 | A | 1922 | A | 1923 | A | 1924 | A | 1925 | * | U | 2019 | G | 2020 | A | 2021 | A | 2023 | A | 2024 | U | 2025 | G | 2026 | G | 2027 | A | 2028 | U | 2029 | G | 2030 | G | 2031 | C | 2032 | G | 2033 | C | 2034 | cWW | cWW | tHH | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GACCCCAGAAAA*UGAAAAUGGAUGGCGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| ACCCCAGAAA*GAAAAUGGAUGGCG | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-cWW-L-R-R-R-R-R-R-R-R-R-R-L-L-L-L-L-tHH-tHS-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: