Motif IL_08745.1 Version IL_08745.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 1-11 | 2-10 | 3-6 | 3-9 | 4-5 | 4-10 | 5-10 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3J79_137 | 3J79 | 0.0000 | 2 | C | 5.8S rRNA | A | 73 | A | 74 | A | 75 | A | 76 | * | U | 83 | G | 84 | A | 85 | C | 86 | U | 89 | A | 92 | U | 93 | cWW | ncSW | tSs | tHW | cWW | ||
| 2 | IL_3J9W_119 | 3J9W | 0.8205 | 1 | BA | LSU rRNA | C | 1629 | G | 1630 | A | 1631 | G | 1632 | * | C | 1455 | A | 1456 | U | 1457 | U | 1459 | G | 1460 | A | 1461 | G | 1462 | cWW | ntSH | cWW | tSs | ncsS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AAAA*UGACUGAAU | 1 |
| CGAG*CAUUUGAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AA*GACUGAA | 1 |
| GA*AUUUGA | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-tHW-tSS-tSS-R-R-cWW
- Heat map statistics
- Min 0.82 | Avg 0.41 | Max 0.82
Coloring options: