IL_3J9W_119

3D structure

PDB id

3J9W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CAUUUGAG*CGAG

Length

12 nucleotides

Bulged bases

3J9W|1|BA|U|1459

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_08745.1

Basepair signature

cWW-L-tHW-tSS-tSS-R-R-cWW

Number of instances in this motif group

2

Unit IDs

3J9W|1|BA|C|1455
3J9W|1|BA|A|1456
3J9W|1|BA|U|1457
3J9W|1|BA|U|1458
3J9W|1|BA|U|1459
3J9W|1|BA|G|1460
3J9W|1|BA|A|1461
3J9W|1|BA|G|1462
*
3J9W|1|BA|C|1629
3J9W|1|BA|G|1630
3J9W|1|BA|A|1631
3J9W|1|BA|G|1632

Current chains

Chain BA

23S ribosomal RNA

Nearby chains