Motif IL_09353.1 Version IL_09353.1 of this group appears in releases 4.1 to 4.1
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 1-7 | 2-6 | 3-5 | 3-6 | 4-5 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8GLP_150 | 8GLP | 0.0000 | 1 | L5 | LSU rRNA | C | 4485 | C | 4486 | A | 4487 | G | 4489 | * | U | 4468 | U | 4469 | G | 4470 | cWW | cWW | ntSH | cWW | |
| 2 | IL_3DD2_004 | 3DD2 | 0.3975 | 2 | B | RNA (26-MER) | G | 3 | A | 4 | A | 5 | A | 8 | * | UFT | 21 | A | 22 | CFL | 23 | cWW | cSW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCAAG*UUG | 1 |
| GAA(CFL)AA*(UFT)A(CFL) | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CAA*U | 1 |
| AA(CFL)A*A | 1 |
Release history
| Release | 4.1 |
|---|---|
| Date | 2025-09-10 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-L-cWW
- Heat map statistics
- Min 0.40 | Avg 0.20 | Max 0.40
Coloring options: