Internal Loop Motif Atlas Release 4.1

#	Motif	Core Nts	Instances
1	IL_01003.2 View exemplar Basepair signature: cWW-cWW-cWW History status: Updated, 2 parents Isolated non-canonical cWW pair (160)	6	213
2	IL_14190.2 View exemplar Basepair signature: cWW-L-cWW History status: Updated, 1 parent Single bulged A (100) Major groove intercalation (4)	5	160
3	IL_97561.2 View exemplar Basepair signature: cWW-L-cWW History status: Updated, 1 parent Single bulged U (84) Major groove intercalation (2)	5	147
4	IL_71625.2 View exemplar Basepair signature: cWW-cWW-cWW History status: Updated, 2 parents Isolated non-canonical cWW pair (61)	6	78
5	IL_28408.2 View exemplar Basepair signature: cWW-L-cWW History status: Updated, 1 parent Single bulged G (29) Major groove intercalation (2) Stack outside cWW (1)	5	69
6	IL_34520.2 View exemplar Basepair signature: cWW-cSH-cWW History status: Updated, 1 parent Minor groove platform (36) Minor groove platform related (2)	5	62
7	IL_05642.2 View exemplar Basepair signature: cWW-L-cWW History status: Updated, 1 parent Single bulged C (31) Major groove intercalation (1)	5	60
8	IL_10892.2 View exemplar Basepair signature: cWW-cHW-cWW History status: Updated, 1 parent Isolated cWH basepair (42) Other IL (3) Isolated tWW contact (1)	6	58
9	IL_15011.2 View exemplar Basepair signature: cWW-L-cWW History status: Updated, 1 parent Single stack bend (27) Single base bend (1) Major groove platform (1)	5	54
10	IL_48076.8 View exemplar Basepair signature: cWW-cSH-cWW History status: Updated, 1 parent Major groove platform (31) Major groove platform related (1)	5	43
11	IL_58355.2 View exemplar Basepair signature: cWW-tSH-tHS-cWW History status: Updated, 1 parent Double sheared (27) Double sheared; A in syn (2)	8	43
12	IL_15225.2 View exemplar Basepair signature: cWW-cWW-cWW-cWW History status: Updated, 2 parents Tandem non-canonical cWW pairs (27)	8	39
13	IL_71194.2 View exemplar Basepair signature: cWW-cWW-cWW-cWW History status: Updated, 2 parents Tandem non-canonical cWW pairs (24) Isolated cWH basepair with non-canonical cWW (1)	8	35
14	IL_71421.2 View exemplar Basepair signature: cWW-cWW History status: Updated, 2 parents Multiple bulged bases (15) Major groove intercalation (5)	4	35
15	IL_74641.2 View exemplar Basepair signature: cWW-tSH-cWW-L History status: Updated, 1 parent Major groove platform; stack outside cWW (21)	6	33
16	IL_90775.2 View exemplar Basepair signature: cWW-tSS-tSH-L-tHS-tHS-cWW History status: Updated, 1 parent Kink-turn (23)	12	30
17	IL_68118.2 View exemplar Basepair signature: cWW-cWW-cWW History status: Updated, 1 parent Isolated non-canonical cWW pair (13) Isolated non-canonical cWW with bulges (9)	6	28
18	IL_77710.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, 1 parent Stack outside cWW (9) Major groove intercalation (9) Multiple bulged bases (2)	5	26
19	IL_36931.2 View exemplar Basepair signature: cWW-cSH-cWW-cWW History status: Updated, 1 parent Major groove platform with extra cWW (5) Major groove minor groove platform with extra cWW (3)	7	24
20	IL_15190.2 View exemplar Basepair signature: cWW-tSH-tHS-tHS-cWW History status: Updated, 1 parent Triple sheared (15)	10	24
21	IL_44609.2 View exemplar Basepair signature: cWW-cWW History status: Updated, 1 parent Multiple bulged bases (8)	4	24
22	IL_42997.5 View exemplar Basepair signature: cWW-L-R-cWW History status: Updated, 1 parent Isolated near basepair (5) Isolated cWS basepair (3) Isolated non-canonical cWW pair (2) Isolated non-canonical cWW contact (1)	6	23
23	IL_73108.2 View exemplar Basepair signature: cWW-cWS-cSH-cWW History status: Updated, 1 parent Major groove minor groove platform; mini C-loop (11) Major groove intercalation (1)	6	23
24	IL_63596.12 View exemplar Basepair signature: cWW-cWS-cSH-tWH-cWW-L History status: Exact match C-loop (16)	7	22
25	IL_08938.1 View exemplar Basepair signature: cWW-tWH-L-tHS-cWW History status: Exact match UAA/GAN (10) Stack outside cWW (1)	9	22
26	IL_46637.2 View exemplar Basepair signature: cWW-L-cWW History status: Updated, 1 parent Major groove intercalation (5) Major groove platform (4)	5	21
27	IL_62167.2 View exemplar Basepair signature: cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW History status: Updated, 1 parent 8x7 Sarcin-Ricin; G-bulge (12)	15	19
28	IL_94991.2 View exemplar Basepair signature: cWW-L-cWW History status: Updated, 1 parent Major groove platform with intercalated tWH (5) Major groove platform with intercalation (3) Minor groove platform (1)	5	17
29	IL_02666.1 View exemplar Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-cWW History status: Exact match 7x6 Sarcin-Ricin; G-bulge (6) Sarcin-Ricin target in LSU H95; G-bulge (1)	13	17
30	IL_87767.2 View exemplar Basepair signature: cWW-L-R-tSH-tHS-cWW History status: Updated, 1 parent Double sheared with non-canonical cWW (7) Other IL (1) Double sheared with near cWW (1)	10	17
31	IL_05821.1 View exemplar Basepair signature: cWW-tSH-tHW-tHS-cWW History status: Exact match tSH-tHW-tHS (11)	10	17
32	IL_71154.2 View exemplar Basepair signature: cWW-cWW-cWW-cWW-cWW History status: Updated, 1 parent Triple non-canonical cWW pairs (9) Partly complementary (3)	10	15
33	IL_76400.1 View exemplar Basepair signature: cWW-cWW-cWW History status: New id, 2 parents Isolated non-canonical cWW pair (9) Isolated non-canonical cWW with bulges (1)	6	15
34	IL_58103.12 View exemplar Basepair signature: cWW-cSH-cWS-L-tSW-R-R-cWW History status: Exact match Symmetric double minor groove platform (4)	10	12
35	IL_24886.2 View exemplar Basepair signature: cWW-L-cWW-L History status: Updated, 1 parent Bulged stacked bases (3) Multiple bulged bases (1)	6	12
36	IL_87316.1 View exemplar Basepair signature: cWW-tHS-cWW History status: Exact match Isolated tHS basepair with bulges (3)	6	12
37	IL_38565.2 View exemplar Basepair signature: cWW-cWW-cWW History status: Updated, 1 parent Isolated non-canonical cWW pair (1)	6	12
38	IL_11411.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-cSH History status: Exact match SSU/LSU pseudoknot (7)	10	12
39	IL_53541.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, 2 parents Stack and bulge (2) Decoding loop related (2) Intercalated cWW (2)	5	12
40	IL_15698.5 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Updated, 1 parent Major groove platform with extra pair (4)	7	11
41	IL_71972.1 View exemplar Basepair signature: cWW-tSS-tSH-L-R-tHS-L-cWW History status: New id, 1 parent Kink-turn (8)	12	11
42	IL_45790.1 View exemplar Basepair signature: cWW-tSH-L-tHS-cWW History status: Exact match UAA/GAN variation (5)	9	11
43	IL_80252.1 View exemplar Basepair signature: cWW-tSH-cWW-tHW-R-L-cWW-L-L-R History status: Exact match	14	10
44	IL_06671.1 View exemplar Basepair signature: cWW-L-cWW-L-L History status: Exact match C-loop (2) Major groove minor groove platform with tHH (1)	7	10
45	IL_10432.1 View exemplar Basepair signature: cWW-tWW-cWW History status: Exact match Isolated tWW turn (3)	6	10
46	IL_55206.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, 1 parent Minor groove platform, major groove intercalation (5)	5	10
47	IL_28217.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L History status: Exact match Intercalated tWH (3)	9	10
48	IL_22311.1 View exemplar Basepair signature: cWW-cWW-tSH-tHS-tHS-L-R-cWW History status: Exact match Triple sheared with non-canonical cWW (3)	14	10
49	IL_87739.1 View exemplar Basepair signature: cWW-tWH-cSH-cWW History status: New id, 1 parent Receptor of 11-nt loop-receptor motif (10)	8	10
50	IL_73855.1 View exemplar Basepair signature: cWW-L-R-L-R-tWH-L-cWW History status: Exact match tHW-tHW cross-strand stack (3)	11	10
51	IL_75527.2 View exemplar Basepair signature: cWW-cWW-cSH-cWW History status: Updated, 1 parent	7	10
52	IL_87975.1 View exemplar Basepair signature: cWW-L-cWW-L History status: Exact match Minor groove platform (4)	6	10
53	IL_14250.1 View exemplar Basepair signature: cWW-tSH-L-cWW-L History status: Exact match Isolated tHS basepair with bulges (3)	8	10
54	IL_20700.1 View exemplar Basepair signature: cWW-tSH-L-R-tHH-tHS-cWW History status: Exact match tSH-tSH-tHH-tHS (3)	12	10
55	IL_82683.3 View exemplar Basepair signature: cWW-L-R-L-cWW-L History status: Exact match	8	9
56	IL_29925.2 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Updated, 1 parent Decoding loop related (7)	7	9
57	IL_89509.1 View exemplar Basepair signature: cWW-cWW History status: Exact match Multiple bulged bases (2)	4	9
58	IL_44923.1 View exemplar Basepair signature: cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L History status: Exact match	16	9
59	IL_05670.1 View exemplar Basepair signature: cWW-cWW History status: New id, 2 parents Multiple bulged bases (7)	4	9
60	IL_16301.1 View exemplar Basepair signature: cWW-cWS-tWH-R-L-R-cWW History status: Exact match C-loop (2) C-loop with bulged stacked A's (2)	9	9
61	IL_60988.2 View exemplar Basepair signature: cWW-cWW-L-R-L-cWW History status: Updated, 1 parent Decoding loop related (1) Minor groove platform related (1) Tandem non-canonical cWW pairs (1) UAA/GAN related (1)	9	8
62	IL_91079.1 View exemplar Basepair signature: cWW-cWW-tWH-L-tHS-cWW History status: Exact match UAA/GAN with extra cWW (5)	11	8
63	IL_48489.1 View exemplar Basepair signature: cWW-tSH-L-tHH-L-cWW History status: Exact match tHS double platform (2)	10	8
64	IL_84014.1 View exemplar Basepair signature: cWW-L-R-cHW-cWW-L-L-tSW-L History status: Exact match	13	8
65	IL_87720.1 View exemplar Basepair signature: cWW-L-R-cWW History status: New id, 2 parents Isolated non-canonical cWW contact (4) Isolated non-canonical cWW pair (2)	6	8
66	IL_32983.2 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Updated, 2 parents	7	8
67	IL_80025.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match	5	8
68	IL_74317.1 View exemplar Basepair signature: cWW-tWH-tHS-cWW History status: Exact match tSH-tHW (2) Other IL (1)	8	8
69	IL_57885.2 View exemplar Basepair signature: cWW-tSH-tSH-tHS-cWW-cWW History status: Updated, 1 parent	12	7
70	IL_70784.1 View exemplar Basepair signature: cWW-cWW-cSH-cWW-L History status: New id, > 2 parents 8-nt loop receptor (2) Other IL (1)	8	7
71	IL_34117.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L History status: New id, 2 parents Isolated basepair with bulged bases (2) Major groove minor groove platform with extra cWW (2)	8	7
72	IL_69229.5 View exemplar Basepair signature: cWW-tSS-tSH-L-tHS-cWW-cWW History status: Updated, 1 parent Kink-turn (6)	12	7
73	IL_66798.3 View exemplar Basepair signature: cWW-L-R-L-R-tHS-cWW History status: Exact match AAA cross-strand stack (3) Triple sheared (1)	10	7
74	IL_89021.3 View exemplar Basepair signature: cWW-L-R-L-R-tHS-cWW History status: Exact match UAA/GAN with extra stack (3) UAA/GAN (2)	10	7
75	IL_77691.7 View exemplar Basepair signature: cWW-tSH-L-R-L-cWW History status: Updated, 1 parent UAA/GAN related (4) UAA/GAN variation (2)	9	7
76	IL_78250.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L History status: New id, 1 parent	9	7
77	IL_95104.1 View exemplar Basepair signature: cWW-tWH-cWW-cSH-cWW History status: New id, 1 parent Receptor of 11-nt loop-receptor motif (7)	9	7
78	IL_38862.5 View exemplar Basepair signature: cWW-cSH-R-tWH-tHS-cWW History status: Exact match 5x5 Sarcin-Ricin with intercalated A; G-bulge (3) tSH-tHW-tHS (1)	10	6
79	IL_47132.1 View exemplar Basepair signature: cWW-cHW-R-L-cHW-cHW-cHW-L-cWW-R History status: New id, 1 parent Part of G-quadruplex (3)	14	6
80	IL_65740.1 View exemplar Basepair signature: cWW-L-R-L-R-cWW History status: New id, > 2 parents Tandem non-canonical cWW pairs (2)	8	6
81	IL_74322.2 View exemplar Basepair signature: cWW-tSH-L-R-L-R-L-R-cWW History status: Updated, 1 parent	12	6
82	IL_24264.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-cWW History status: Exact match Minor groove platform (3)	5	6
83	IL_47352.2 View exemplar Basepair signature: cWW-cWW-tSH-L-R-L-cWW History status: Updated, 1 parent	11	6
84	IL_36175.2 View exemplar Basepair signature: cWW-L-cWW History status: Updated, 2 parents	5	6
85	IL_10396.1 View exemplar Basepair signature: cWW-L-cWW-L-L History status: Exact match	7	6
86	IL_04638.4 View exemplar Basepair signature: cWW-tSH-tHW-tHS-L-cWW-L-L History status: Exact match tSH-tHS-tHW (2)	13	6
87	IL_12566.5 View exemplar Basepair signature: cWW-L-tHS-L-cWW-L History status: Exact match	9	6
88	IL_29495.1 View exemplar Basepair signature: cWW-tSH-tSH-tHS-tHS-cWW History status: New id, 2 parents Quadruple sheared (4) Triple sheared with non-canonical cWW (1)	12	6
89	IL_43716.1 View exemplar Basepair signature: cWW-tSH-tHW-L-cWW-L History status: New id, 1 parent tSH-tHW (5)	10	6
90	IL_46174.4 View exemplar Basepair signature: cWW-cSS-tSS-tSH-L-cWW-tHW-cWW History status: Exact match Kink-turn with non-sequential stacking (4)	12	6
91	IL_25186.4 View exemplar Basepair signature: cWW-L-R-L-R-L-R-cWW History status: Exact match	10	6
92	IL_34618.2 View exemplar Basepair signature: cWW-L-cWS-cWW History status: Updated, 1 parent	7	6
93	IL_05502.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match Decoding loop related (1)	7	6
94	IL_57188.6 View exemplar Basepair signature: cWW-tWW-L-tWW-cWW-cSH History status: Exact match Kink-turn related (3)	11	6
95	IL_82096.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match Minor groove platform with extra cWW (2)	7	6
96	IL_98835.1 View exemplar Basepair signature: cWW-cWW-L-R-L-cWW-L History status: New id, 1 parent Tandem non-canonical cWW pairs (2)	10	6
97	IL_93108.1 View exemplar Basepair signature: cWW-cHW-cWH-R-L-cWH-cHW-cHW-cWH-cWH-cHW-L-cWW-L-R-cWW-L-cWW History status: New id, 1 parent G-quadruplex (3)	22	6
98	IL_99692.3 View exemplar Basepair signature: cWW-tSS-tSH-L-R-R-L-cWW-L-L History status: Exact match Kink-turn (4)	13	6
99	IL_35186.2 View exemplar Basepair signature: cWW-tSH-tHW-L-R-cWW-cWW History status: Updated, 1 parent tSH-tHW-tHS-cWW (4)	12	6
100	IL_93476.1 View exemplar Basepair signature: cWW-tSH-L-R-tSS-tHS-L-R-cWW History status: Exact match	12	6
101	IL_51265.4 View exemplar Basepair signature: cWW-L-tSH-L-tHS-cWW History status: Exact match Kink-turn from U4 (3) Kink-turn from T-box riboswitch (1)	10	5
102	IL_20847.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R History status: Exact match	8	5
103	IL_16386.5 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Intercalated cWS (1)	5	5
104	IL_52042.1 View exemplar Basepair signature: cWW-cSW-tWH-L-R-L-R-tHS-cWW History status: Exact match Kink-turn related (1)	13	5
105	IL_16458.5 View exemplar Basepair signature: cWW-L-R-L-R-cSH-tWH-tHS-cWW History status: Exact match Sarcin-Ricin target in LSU H95; G-bulge (3) 7x6 Sarcin-Ricin; G-bulge (1)	13	5
106	IL_26900.1 View exemplar Basepair signature: cWW-cSH-cWS-tWH-cWW History status: Exact match C-loop (3)	7	5
107	IL_94128.1 View exemplar Basepair signature: cWW-cWW-L-R-cSH-R-tWH-tHS-cWW History status: Exact match 7x7 Sarcin-Ricin with intercalated A; G-bulge (2)	14	5
108	IL_17069.6 View exemplar Basepair signature: cWW-tSH-tHH-cSS-tWW-tHH-tSS-cWW History status: Exact match Kink-turn related (3)	13	5
109	IL_55553.2 View exemplar Basepair signature: cWW-L-R-cWW History status: Updated, 1 parent Decoding loop related (1) Decoding loop with one bulged A (1) Isolated tWW contact (1)	6	5
110	IL_84044.1 View exemplar Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-cWW-L History status: Exact match 8x6 Sarcin-Ricin with inserted Y; G-bulge (3)	14	5
111	IL_41504.1 View exemplar Basepair signature: cWW-tSH-L-R-L-tHH-cWW History status: Exact match	13	5
112	IL_59580.1 View exemplar Basepair signature: cWW-cHW-cWW-cWW History status: New id, 1 parent Tandem non-canonical cWW pairs (1)	8	5
113	IL_18228.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match	5	5
114	IL_25873.2 View exemplar Basepair signature: cWW-cSH-cWS-cWW-cWW History status: Updated, 1 parent	9	5
115	IL_89862.1 View exemplar Basepair signature: cWW-L-tHS-L-R-L-cWW-L History status: Exact match	11	5
116	IL_00767.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R History status: New id, no parents	10	5
117	IL_25943.1 View exemplar Basepair signature: cWW-tWH-tHH-tHS-cWW History status: Exact match	10	5
118	IL_82453.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match Isolated cWS basepair (1)	7	5
119	IL_93502.1 View exemplar Basepair signature: cWW-L-R-tSH-tHW-tHH-tHS-cWW-cWW History status: Exact match 9x8 Sarcin-Ricin; G-bulge (1) tSH-tHW-tHH-tHS (1)	16	5
120	IL_16315.2 View exemplar Basepair signature: cWW-cWW-L-cWW History status: Updated, 2 parents	7	4
121	IL_31545.1 View exemplar Basepair signature: cWW-L-R-L-cWW-cWW-cWW History status: Exact match	11	4
122	IL_65996.1 View exemplar Basepair signature: cWW-L-cWW-L-tSH-R-cWW History status: Exact match Kink-turn with embedded cWW pair (2)	11	4
123	IL_69145.4 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L History status: Exact match Pseudoknot (3)	10	4
124	IL_14684.1 View exemplar Basepair signature: cWW-tWW-tWW-tSS-L-cWW History status: Exact match	11	4
125	IL_62925.1 View exemplar Basepair signature: cWW-L-cWW-L-L History status: Exact match	7	4
126	IL_76776.1 View exemplar Basepair signature: cWW-cWW-L-R-cWW History status: New id, 2 parents Tandem non-canonical cWW pairs (2) tSH-tHW (1)	8	4
127	IL_24485.1 View exemplar Basepair signature: cWW-cWW-tWH-tWH-tHW-tHW-cWW History status: Exact match	14	4
128	IL_39054.1 View exemplar Basepair signature: cWW-tWW-L-tWW-cWW-L History status: Exact match	10	4
129	IL_52092.1 View exemplar Basepair signature: cWW-cWS-cWW History status: Exact match	6	4
130	IL_83497.1 View exemplar Basepair signature: cWW-L-R-cSH-cSH-cWW History status: New id, 1 parent 8-nt loop receptor (3)	8	4
131	IL_04650.4 View exemplar Basepair signature: cWW-cSH-cWW-L-L-R-L-R-L History status: Updated, 1 parent	11	4
132	IL_34501.1 View exemplar Basepair signature: cWW-tSH-tHH-L-R-L-R-L-R-L-R-L-R-L-R-L-cWW-L-cWW History status: Exact match	24	4
133	IL_74852.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L History status: New id, 2 parents	10	4
134	IL_61299.6 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L History status: Updated, 1 parent Isolated basepair with bulged bases (1)	9	4
135	IL_69301.1 View exemplar Basepair signature: cWW-cWW-L-R-L-cWW History status: New id, 1 parent	9	4
136	IL_49140.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: New id, 1 parent	7	4
137	IL_61370.1 View exemplar Basepair signature: cWW-cWS-L-cWW-L History status: Exact match Minor groove platform (2)	7	4
138	IL_00086.1 View exemplar Basepair signature: cWW-cWW-L-cWW-L History status: Exact match	8	4
139	IL_82016.1 View exemplar Basepair signature: cWW-L-tHS-L-cWW History status: Exact match UAA/GAN related, with intercalation (3)	8	4
140	IL_19897.5 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R-L History status: Updated, 1 parent	11	4
141	IL_75289.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Multiple bulged bases (1) Other IL (1)	5	4
142	IL_10994.2 View exemplar Basepair signature: cWW-cWW-cWW-cWW History status: Updated, 1 parent Tandem non-canonical cWW pairs (3) Non-canonical cWW with near cWH (1)	8	4
143	IL_75501.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, 1 parent Single stack bend with SAM intercalation (2) Single stack bend (1)	5	4
144	IL_93336.1 View exemplar Basepair signature: cWW-tHS-cWW History status: Exact match	8	4
145	IL_65359.1 View exemplar Basepair signature: cWW-tSH-L-R-L-R-L-R-cWW-cWW History status: Exact match	14	4
146	IL_50715.4 View exemplar Basepair signature: cWW-tSH-tHH-L-R-L-R-L-tWW-L-cWW-L-L-L-R-L History status: Exact match	21	4
147	IL_28482.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match	7	4
148	IL_31359.1 View exemplar Basepair signature: cWW-L-cWW-L-cWW-L History status: Exact match	9	4
149	IL_65653.1 View exemplar Basepair signature: cWW-tSW-tHW-tWW-tWH-cSH-L-L-tHS-L-cWW-L History status: Exact match	16	4
150	IL_42992.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L-L History status: New id, no parents Reverse turn (4)	11	4
151	IL_60572.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L History status: New id, 2 parents	8	4
152	IL_76658.1 View exemplar Basepair signature: cWW-L-R-cSH-cWW History status: Exact match	8	4
153	IL_01372.1 View exemplar Basepair signature: cWW-L-cWW-L History status: Exact match	6	3
154	IL_96303.1 View exemplar Basepair signature: cWW-cSH-tSW-tHW-cWW-L-L-R-L-R History status: Exact match	13	3
155	IL_29346.3 View exemplar Basepair signature: cWW-L-cWW-L-L History status: Exact match Left turn (1)	7	3
156	IL_10133.1 View exemplar Basepair signature: cWW-L-R-tHW-L-cWW-L History status: New id, 1 parent UAA/GAN related (2) UAA/GAN (1)	10	3
157	IL_88082.2 View exemplar Basepair signature: cWW-L-tSS-L-cWW-L History status: Exact match	9	3
158	IL_60797.2 View exemplar Basepair signature: cWW-cWW-tSH-tHW-tHW-L-R-L-cWW-cWW History status: Exact match	17	3
159	IL_82706.2 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match	7	3
160	IL_71138.1 View exemplar Basepair signature: cWW-tSH-tHW-L-R-L-R-L-R-tWH-tHS-cWW History status: Exact match Bacterial 5S Loop E (2)	18	3
161	IL_01742.1 View exemplar Basepair signature: cWW-L-cWW-R-cWW History status: Exact match	8	3
162	IL_73099.1 View exemplar Basepair signature: cWW-cHW-L-R-L-cWW History status: New id, 1 parent	9	3
163	IL_21667.2 View exemplar Basepair signature: cWW-tSH-L-R-L-cWW History status: Exact match	9	3
164	IL_31915.3 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-cWW History status: Updated, 1 parent	15	3
165	IL_19668.2 View exemplar Basepair signature: cWW-cWW-L-cWW-L History status: Updated, 1 parent Isolated non-canonical cWW pair (2)	8	3
166	IL_27393.12 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R History status: Updated, 1 parent	10	3
167	IL_22002.1 View exemplar Basepair signature: cWW-L-cWW-L History status: Exact match	6	3
168	IL_87030.1 View exemplar Basepair signature: cWW-cWW-cWW-L-R History status: Exact match	10	3
169	IL_25001.1 View exemplar Basepair signature: cWW-tSH-cSH-tWH-cSH-cHW-cWH-cWW-cWW History status: Exact match	15	3
170	IL_81522.4 View exemplar Basepair signature: cWW-cWS-L-cWW History status: Updated, 1 parent Major groove minor groove platform with intercalation; mini C-loop (2)	6	3
171	IL_83945.1 View exemplar Basepair signature: cWW-cWW History status: New id, no parents Multiple bulged bases (3)	4	3
172	IL_07396.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-cHH History status: Exact match SSU/LSU pseudoknot (1)	10	3
173	IL_29904.1 View exemplar Basepair signature: cWW-tSS-tSH-L-tHS-cWW-L History status: New id, 1 parent Kink-turn (3)	11	3
174	IL_94910.1 View exemplar Basepair signature: cWW-tSS-tSH-L-R-R-L-cWW-L History status: Exact match Kink-turn (3)	12	3
175	IL_02349.4 View exemplar Basepair signature: cWW-tSH-tWH-cSH-tWH-tHS-cWW History status: Exact match 8x6 Sarcin-Ricin with bulged A; G-bulge (3)	13	3
176	IL_59049.2 View exemplar Basepair signature: cWW-cWW-L-R-L-R-L-R-L-R-L-cWW-L History status: Exact match	16	3
177	IL_05192.7 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L History status: Updated, 1 parent	10	3
178	IL_75283.2 View exemplar Basepair signature: cWW-tSS-L-R-L-tHS-L-cWW-L-tWH-tWH-L-L-R History status: Exact match	18	3
179	IL_07469.3 View exemplar Basepair signature: cWW-tSH-cWW-cSH-R-cWW History status: Exact match	10	3
180	IL_22278.1 View exemplar Basepair signature: cWW-tSH-tHH-cSH-tWH-tHS-R-L-cWW-L-cWW History status: New id, no parents 10x8 Sarcin-Ricin; G-bulge (3)	18	3
181	IL_32056.1 View exemplar Basepair signature: cWW-L-cWW-L-L-tWH-R-L-R-L History status: Exact match	13	3
182	IL_49163.1 View exemplar Basepair signature: cWW-cWH-tHS-cWW-cSH-cWW History status: New id, 1 parent	8	3
183	IL_98200.1 View exemplar Basepair signature: cWW-L-R-tHW-L-cWW History status: Exact match	9	3
184	IL_28284.1 View exemplar Basepair signature: cWW-cWW-tWW-cWW History status: New id, 1 parent tWW and non-canonical cWW (1) Non canonical cWW and near pair (1)	8	3
185	IL_34739.3 View exemplar Basepair signature: cWW-tWW-tWW-L-R-L-R-L-cWW-L-L-R-L-R-L-R-L-R History status: Exact match	20	3
186	IL_78800.2 View exemplar Basepair signature: cWW-cSH-L-cWW History status: Exact match	6	3
187	IL_25463.2 View exemplar Basepair signature: cWW-L-cWW-L-L History status: Exact match	7	3
188	IL_05553.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW History status: New id, 1 parent	9	3
189	IL_00680.1 View exemplar Basepair signature: cWW-L-R-tWH-L-R-L-cWW-cWW History status: Exact match tWH-tWH-tHW-tHW (1)	13	3
190	IL_46387.3 View exemplar Basepair signature: cWW-cWW-L-cWW-L History status: Updated, 1 parent	8	3
191	IL_79144.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match 90 degree turn (1)	5	3
192	IL_95349.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW History status: Exact match	12	3
193	IL_03350.3 View exemplar Basepair signature: cWW-tWH-cWW-L-L-cWW-L-L-L History status: Updated, 1 parent Reverse kink-turn related (3)	13	3
194	IL_82100.1 View exemplar Basepair signature: cWW-tWW-cSH-tWH-tHS-cWW History status: Exact match 6x5 Sarcin-Ricin; G-bulge (1)	11	3
195	IL_34942.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW History status: New id, 1 parent Other IL (1)	9	3
196	IL_53348.1 View exemplar Basepair signature: cWW-L-R-tSW-tHH-cSH-tWH-tHS-cWW History status: Exact match 8x7 Sarcin-Ricin; G-bulge (1)	15	3
197	IL_18472.5 View exemplar Basepair signature: cWW-tSW-R-L-R-L-R-cWW History status: Exact match	11	3
198	IL_74205.1 View exemplar Basepair signature: cWW-cWW-tSS-tSH-L-tHS-R-cWW-L History status: New id, no parents Kink-turn (3)	14	3
199	IL_82292.2 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW History status: Exact match Tandem non-canonical cWW pairs with near WC pairs (1) Double sheared; A in syn; two near cWW pairs (1)	12	3
200	IL_24134.1 View exemplar Basepair signature: cWW-tSS-L-R-L-tHS-L-cWW-L-L History status: Exact match Kink-turn (3)	12	3
201	IL_72211.1 View exemplar Basepair signature: cWW-L-cWW-L History status: Exact match Multiple bulged bases (1) Bulged stacked bases (1)	6	3
202	IL_18824.1 View exemplar Basepair signature: cWW-L-cWW-L History status: Exact match	6	3
203	IL_68574.5 View exemplar Basepair signature: cWW-tHH-tHS-cWW History status: Exact match	8	3
204	IL_12056.1 View exemplar Basepair signature: cWW-L-R-R-bif-cWW History status: Exact match	14	2
205	IL_33711.1 View exemplar Basepair signature: cWW-cSH-cWW-L-L-R-L History status: Exact match Minor groove platform (2)	9	2
206	IL_69065.1 View exemplar Basepair signature: cWW-L-R-L-R-cWW History status: New id, 1 parent Double sheared (2)	8	2
207	IL_06606.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-cWW History status: New id, 1 parent	14	2
208	IL_45860.1 View exemplar Basepair signature: cWW-L-R-L-R-cWW History status: New id, 1 parent tWW and near cWH (1)	8	2
209	IL_93657.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R-L-R-L History status: New id, 1 parent	13	2
210	IL_01632.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R-L History status: New id, no parents	11	2
211	IL_04332.3 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L-R-L-R-L History status: Exact match	13	2
212	IL_26728.3 View exemplar Basepair signature: cWW-cSH-R-cSH-cWW-cWW History status: Exact match	9	2
213	IL_21086.2 View exemplar Basepair signature: cWW-L-R-L-R-L-R-cWW History status: Updated, 1 parent Triple non-canonical cWW pairs (1)	10	2
214	IL_45930.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R History status: New id, no parents	10	2
215	IL_58354.1 View exemplar Basepair signature: cWW-tWW-L-tWH-cSS-tSS-tWH-cSS-tWH-R-tSS-R-L-L-cWW-L-cWW History status: New id, no parents Kink-turn related (2)	22	2
216	IL_96590.1 View exemplar Basepair signature: cWW-tSH-tHW-tWH-tHS-cWW History status: New id, 1 parent tSH-tHW-tWH-tHS (2)	12	2
217	IL_34470.3 View exemplar Basepair signature: cWW-cSH-cWW-tHH-tWH-tHS-cWW-tSH-R-cWW-L History status: Exact match 9x8 Sarcin-Ricin with GA cWW pair; G-bulge (2)	17	2
218	IL_63519.1 View exemplar Basepair signature: cWW-cWW-L-R-cSH-cWW History status: Exact match	9	2
219	IL_02111.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L History status: Exact match	9	2
220	IL_39721.1 View exemplar Basepair signature: cWW-tSH-tHH-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-cWW History status: Exact match	25	2
221	IL_12697.1 View exemplar Basepair signature: cWW-cWW-L-R-tHS-cWW History status: Exact match	10	2
222	IL_52209.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R-L History status: New id, no parents	11	2
223	IL_69271.3 View exemplar Basepair signature: cWW-cWW-L-R-L-cWW-L-L-R History status: Exact match	14	2
224	IL_83814.1 View exemplar Basepair signature: cWW-L-cWW-L-cWW-L History status: New id, no parents	9	2
225	IL_37467.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW History status: Exact match	9	2
226	IL_94684.1 View exemplar Basepair signature: cWW-tWH-R-L-cWW-L-L History status: Exact match	9	2
227	IL_31990.1 View exemplar Basepair signature: cWW-tWW-cWW History status: Exact match	6	2
228	IL_67427.1 View exemplar Basepair signature: cWW-cWW-L-R-L-R-cWW-cWW History status: Exact match Triple sheared related (1)	11	2
229	IL_13042.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L-R History status: New id, no parents	10	2
230	IL_19687.1 View exemplar Basepair signature: cWW-L-cWW-L-cWW History status: New id, 1 parent Isolated non-canonical cWW pair (1)	8	2
231	IL_52564.1 View exemplar Basepair signature: cWW-L-cWW-L History status: Exact match	6	2
232	IL_91698.1 View exemplar Basepair signature: cWW-tWW-L-R-L-R-L-R-L-tHW-R-L-cWW History status: Exact match	17	2
233	IL_22028.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L-cWW-L History status: Exact match	13	2
234	IL_63969.1 View exemplar Basepair signature: cWW-L-tHS-cWW History status: New id, 1 parent	7	2
235	IL_41344.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match	7	2
236	IL_73464.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Single bulged A (1)	5	2
237	IL_28245.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L History status: New id, 1 parent Kink-turn (1)	10	2
238	IL_37738.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, 1 parent 180 degree turn (1)	5	2
239	IL_46203.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW History status: New id, 1 parent	12	2
240	IL_56912.1 View exemplar Basepair signature: cWW-cWW-L-R-L-cWW-L-cWW History status: New id, no parents	12	2
241	IL_64048.1 View exemplar Basepair signature: cWW-L-cWW-L-L-tWH-R-L-R History status: Exact match	12	2
242	IL_02511.1 View exemplar Basepair signature: cWW-tSH-L-cWW-L-L-R-L History status: Exact match	11	2
243	IL_17790.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R-L-R History status: New id, 1 parent	12	2
244	IL_59302.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L History status: Exact match	9	2
245	IL_70335.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match	7	2
246	IL_08849.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match 180 degree turn (1)	5	2
247	IL_38394.1 View exemplar Basepair signature: cWW-tWH-cWW-L-L-R-L History status: Exact match Stack outside cWW (1)	10	2
248	IL_46211.1 View exemplar Basepair signature: cWW-tWW-tHS-cWW History status: New id, no parents	8	2
249	IL_18188.1 View exemplar Basepair signature: cWW-L-cWW History status: New id, 1 parent Other IL (1)	5	2
250	IL_34822.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW History status: Exact match	12	2
251	IL_44624.1 View exemplar Basepair signature: cWW-tWH-cWW-L-cWW-tSS-cSS-cWW-L History status: Exact match	14	2
252	IL_61988.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW History status: New id, 1 parent Partly complementary (1)	9	2
253	IL_16194.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-cWW History status: New id, 1 parent	16	2
254	IL_22564.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW History status: Exact match	10	2
255	IL_30730.1 View exemplar Basepair signature: cWW-cSH-L-R-L-cWW-L-R History status: Exact match	10	2
256	IL_71706.1 View exemplar Basepair signature: cWW-L-cWW-L History status: Exact match Other IL (1)	6	2
257	IL_32376.1 View exemplar Basepair signature: cWW-cSH-cWW-tWH-L-cWW-L-L History status: Exact match	11	2
258	IL_20358.1 View exemplar Basepair signature: cWW-L-R-L-cWW-cWW History status: Exact match	9	2
259	IL_70469.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L History status: New id, 1 parent	10	2
260	IL_84751.1 View exemplar Basepair signature: cWW-L-cWW-L History status: New id, 1 parent	6	2
261	IL_09353.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: New id, 1 parent	7	2
262	IL_16218.3 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW History status: Exact match	9	2
263	IL_30959.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: New id, 1 parent	7	2
264	IL_38603.1 View exemplar Basepair signature: cWW-cWS-L-R-L-R-R-L-cWW History status: Exact match	11	2
265	IL_89984.3 View exemplar Basepair signature: cWW-L-R-L-cWW History status: Exact match	7	2
266	IL_53509.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L-R-L-R History status: New id, no parents	12	2
267	IL_38634.5 View exemplar Basepair signature: cWW-cWH-L-R-cWW History status: Exact match cWH basepair and non-canonical AC (2)	8	2
268	IL_04211.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-cWW-L-L History status: Exact match	14	2
269	IL_99893.1 View exemplar Basepair signature: cWW-tHS-tWH-cWH-cWW-L-L-cWW History status: Exact match	13	2
270	IL_28855.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-cWW-L-L History status: Exact match	12	2
271	IL_62329.1 View exemplar Basepair signature: cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW History status: Exact match	15	2
272	IL_70744.1 View exemplar Basepair signature: cWW-tSH-tHS-L-R-cWW History status: Exact match Triple sheared (1)	10	2
273	IL_09908.1 View exemplar Basepair signature: cWW-L-tHH-L-R-L-cWW-L History status: Exact match Reverse kink-turn (1)	11	1
274	IL_24254.1 View exemplar Basepair signature: cWW-cWW-tHH-cSH-tWH-tHS-cWW History status: Exact match 7x6 Sarcin-Ricin with UU cWW pair; G-bulge (1)	13	1
275	IL_31504.1 View exemplar Basepair signature: cWW-cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L History status: Exact match	18	1
276	IL_72716.1 View exemplar Basepair signature: cWW-tSH-tWW-L-R-cWW History status: New id, no parents	10	1
277	IL_80209.1 View exemplar Basepair signature: cWW-cHW-L-cWW-L-L-R-L-R-L History status: Exact match	13	1
278	IL_88072.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L-R-L-R-L History status: Exact match	13	1
279	IL_04307.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-cWW-L-L-R History status: Exact match	16	1
280	IL_19001.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-cWW History status: New id, no parents	11	1
281	IL_26685.1 View exemplar Basepair signature: cWW-L-cWW-L History status: Exact match Multiple bulged bases (1)	6	1
282	IL_60657.1 View exemplar Basepair signature: cWW-cWW-L-R-L-cWW-L-L-R-L-R-L-R History status: Exact match	16	1
283	IL_90645.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-cSH-R-tWH-R-cWW-cWW History status: New id, no parents	17	1
284	IL_14445.1 View exemplar Basepair signature: cWW-L-tHS-L-R-cWW History status: New id, no parents	9	1
285	IL_35996.1 View exemplar Basepair signature: cWW-L-R-L-R-tWH-L-R-L-R-L-R-L-cWW-R-L-cWW History status: Exact match	21	1
286	IL_53787.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R-L-R-L-R History status: Exact match Pseudoknot (1)	14	1
287	IL_62654.1 View exemplar Basepair signature: cWW-tSH-tHH-tHS-cWW History status: Exact match tSH-tHH-tHS (1)	10	1
288	IL_76748.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-cWW-L History status: New id, no parents	14	1
289	IL_85993.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: New id, no parents	7	1
290	IL_38969.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L History status: Exact match Reverse kink-turn related (1)	9	1
291	IL_73002.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-cWW-L-L-R History status: Exact match	16	1
292	IL_96371.1 View exemplar Basepair signature: cWW-tHH-cWW History status: Exact match	6	1
293	IL_12409.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-cWW History status: New id, no parents	11	1
294	IL_19048.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cSH-L-R-cWW-cWW History status: Exact match	14	1
295	IL_43140.1 View exemplar Basepair signature: cWW-L-cWW-cWH-L-L History status: Exact match	9	1
296	IL_29357.1 View exemplar Basepair signature: cWW-L-R-L-R-cWH-tHW-cSH-cWW-L-L-cWW-R-R History status: Exact match	18	1
297	IL_54050.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L-L History status: Exact match	11	1
298	IL_86129.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R History status: Exact match	8	1
299	IL_93889.1 View exemplar Basepair signature: cWW-R-tSH-L-cSH-L-L-R-L-R-L-R-L-R-L-R-L-L History status: Exact match	21	1
300	IL_31561.1 View exemplar Basepair signature: cWW-L-R-tWH-tWH-L-R-L-cWW History status: Exact match	13	1
301	IL_47603.1 View exemplar Basepair signature: cWW-cWW-L-R-L-R-cWW History status: New id, no parents	10	1
302	IL_66663.1 View exemplar Basepair signature: cWW-L-tHS-tSW-tWH-cWH-cWW-L-cWW History status: Exact match	15	1
303	IL_80398.1 View exemplar Basepair signature: cWW-L-cSW-L-R-cWW History status: Exact match Minor groove platform (1)	8	1
304	IL_88131.1 View exemplar Basepair signature: cWW-tWH-L-R-tHS-cWW History status: New id, 1 parent UAA/GAN with extra stack (1)	10	1
305	IL_19516.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L-cWW-L-L-L-R-L-R History status: Exact match Pseudoknot (1)	18	1
306	IL_43467.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-cWW-L-L-R-L History status: Exact match Pseudoknot (1)	17	1
307	IL_74768.1 View exemplar Basepair signature: cWW-cWW-L-R-L-R-L-R-cWW-cWW History status: New id, no parents	14	1
308	IL_07171.1 View exemplar Basepair signature: cWW-L-cWW-L History status: Exact match Bulged stacked bases (1)	6	1
309	IL_46086.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R History status: Exact match	8	1
310	IL_54896.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L-R-L-R History status: Exact match	12	1
311	IL_77045.1 View exemplar Basepair signature: cWW-L-tSW-L-tHW-cWW-L History status: Exact match Kink-turn (1)	11	1
312	IL_86760.1 View exemplar Basepair signature: cWW-L-tHH-L-R-L-cWW-L-R History status: New id, no parents	12	1
313	IL_16671.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L History status: New id, no parents	9	1
314	IL_81392.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L-L-R-L History status: Exact match	13	1
315	IL_96788.1 View exemplar Basepair signature: cWW-tHW-tHS-cWW-cWW History status: Exact match	10	1
316	IL_61286.1 View exemplar Basepair signature: cWW-L-R-L-R-L-tWH-L-tHS-cWW History status: Exact match 8x6 Sarcin-Ricin with inserted A; G-bulge (1)	14	1
317	IL_91386.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-cWW-L-cWW History status: New id, no parents	18	1
318	IL_07173.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L History status: Exact match	8	1
319	IL_29895.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L-L History status: New id, no parents	11	1
320	IL_46112.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L History status: Exact match	9	1
321	IL_02203.1 View exemplar Basepair signature: cWW-cSW-cWW-cWW History status: Exact match	8	1
322	IL_10755.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-cWW-L-L History status: New id, no parents	13	1
323	IL_41257.1 View exemplar Basepair signature: cWW-L-tHS-L-R-cWW-L History status: Exact match	10	1
324	IL_58415.1 View exemplar Basepair signature: cWW-L-R-tHW-tHW-L-R-L-R-cWW-cWW History status: Exact match	16	1
325	IL_73197.1 View exemplar Basepair signature: cWW-cWW-L-R-L-R-L-R-tWH-R-L-R-L-cWW History status: New id, no parents	17	1
326	IL_89047.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-cWH-L-cWW History status: Exact match	16	1
327	IL_96857.1 View exemplar Basepair signature: cWW-L-R-L-R-tSH-L-cWW History status: New id, no parents Other IL (1)	11	1
328	IL_04736.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW History status: Exact match	12	1
329	IL_44325.1 View exemplar Basepair signature: cWW-cWH-cWW-L History status: Exact match	6	1
330	IL_74957.1 View exemplar Basepair signature: cWW-L-cHW-L-cWW-L History status: Exact match cWH basepair with bulged bases (1)	9	1
331	IL_37603.1 View exemplar Basepair signature: cWW-L-cWW-L-cWW-L-L History status: Exact match	10	1
332	IL_71334.1 View exemplar Basepair signature: cWW-L-cWW-L-L History status: New id, no parents Major groove intercalation (1)	7	1
333	IL_10796.1 View exemplar Basepair signature: cWW-L-R-cWW History status: Exact match	6	1
334	IL_17765.1 View exemplar Basepair signature: cWW-tWH-cHW-L-tSS-cSS-cWW-R-L History status: Exact match	14	1
335	IL_32016.1 View exemplar Basepair signature: cWW-tSH-tSH-tSS-tHS-L-R-cWW History status: Exact match Kink-turn (1)	12	1
336	IL_67623.1 View exemplar Basepair signature: cWW-tSW-cSW-L-cSW-L-R-L-cWW-cWW History status: Exact match Minor groove platform related (1)	14	1
337	IL_81731.1 View exemplar Basepair signature: cWW-cWW-L-R-L-R-L-cWW-L-tWW-L-R-L History status: Exact match	17	1
338	IL_89099.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW History status: Exact match Other IL (1)	12	1
339	IL_13358.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-cWW-L-L History status: Exact match	13	1
340	IL_19852.1 View exemplar Basepair signature: cWW-tWH-cWW-cWH-cWH-cWH History status: Exact match Part of G-quadruplex (1)	11	1
341	IL_44438.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-cWW History status: Exact match	12	1
342	IL_52736.1 View exemplar Basepair signature: cWW-cHW-L-R-L-R-cWH-cWW History status: New id, no parents	12	1
343	IL_70096.1 View exemplar Basepair signature: cWW-L-cWW-cWW History status: Exact match Kink-turn related (1)	7	1
344	IL_92274.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L-R-L-R History status: New id, no parents	12	1
345	IL_25412.1 View exemplar Basepair signature: cWW-L-cWW-L-L History status: Exact match Major groove intercalation (1)	7	1
346	IL_41465.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: New id, no parents	7	1
347	IL_67780.1 View exemplar Basepair signature: cWW-cSH-L-R-L-L-R-L History status: Exact match	10	1
348	IL_73700.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-cWW-tHS-cWW History status: Exact match	13	1
349	IL_89312.1 View exemplar Basepair signature: cWW-tSH-L-cWS-cWW-L History status: Exact match	10	1
350	IL_13785.1 View exemplar Basepair signature: cWW-L-tHS-cWW History status: New id, 1 parent	7	1
351	IL_52743.1 View exemplar Basepair signature: cWW-tSW-L-cSW-L-cWW-L History status: Exact match	10	1
352	IL_61665.1 View exemplar Basepair signature: cWW-L-cWW-L-L-R-L-R-L-R-L-R-L-R-L-R-L-tWW-R-L-R History status: Exact match	24	1
353	IL_92689.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L History status: Exact match	9	1
354	IL_00670.1 View exemplar Basepair signature: cWW-cWW-cWW-R-cWW-R-cWW-R-cWW-R-L-L-L-L-L-L-L History status: New id, no parents	22	1
355	IL_15991.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-cWW-L-L History status: Exact match	21	1
356	IL_30441.1 View exemplar Basepair signature: cWW-cSH-tSW-tHW-cWW-L-L-R-L-L-R History status: Exact match	14	1
357	IL_64403.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-cWW-L-L-R History status: Exact match	14	1
358	IL_87723.1 View exemplar Basepair signature: cWW-L-R-cWW History status: New id, no parents	6	1
359	IL_32202.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-cSH-L-L-R-L-cWW-L History status: Exact match	24	1
360	IL_49867.1 View exemplar Basepair signature: cWW-cWW-L-R-L-R-tHW-R-L-L-cWW History status: Exact match	15	1
361	IL_73759.1 View exemplar Basepair signature: cWW-cSH-tHS-cWH-cHW-cWW History status: Exact match Part of G-quadruplex (1)	9	1
362	IL_13874.1 View exemplar Basepair signature: cWW-cWH-tHS-cWW-cSH-cWH-cHW-cWW History status: Exact match	12	1
363	IL_19929.1 View exemplar Basepair signature: cWW-tSH-tHW-L-cWW-L-L History status: Exact match	11	1
364	IL_28304.1 View exemplar Basepair signature: cWW-R-L-R-L-R-L-R-L-L-L-cWW-cWW History status: Exact match	16	1
365	IL_53180.1 View exemplar Basepair signature: cWW-L-R-L-cWW History status: New id, 1 parent	7	1
366	IL_70437.1 View exemplar Basepair signature: cWW-L-cSW-cWW-L-L-R-L-R-L-R-L History status: New id, no parents	15	1
367	IL_84409.1 View exemplar Basepair signature: cWW-tSS-L-cWH-L-cSH-cHW-tWH-cSS-tWH-tSW-cWS-R-L-R-cSH-R-cWW-L History status: Exact match	23	1
368	IL_57675.1 View exemplar Basepair signature: cWW-cWW-L-cWW-L-L-R-L-R-L-R-L-R-L-R History status: New id, no parents	18	1
369	IL_64842.1 View exemplar Basepair signature: cWW-L-tWH-L-cWW-L-cSH History status: Exact match	10	1
370	IL_41853.1 View exemplar Basepair signature: cWW-L-tHH-L-tHS-L-cWW-L-L History status: Exact match	13	1
371	IL_49971.1 View exemplar Basepair signature: cWW-cWH-cWW-cWW-L-L-R History status: Exact match	10	1
372	IL_59724.1 View exemplar Basepair signature: cWW-L-R-L-R-cSH-tWH-tHS-R-L-cWW History status: Exact match 8x7 Sarcin-Ricin with CC bifurcated pair; G-bulge (1)	15	1
373	IL_68243.1 View exemplar Basepair signature: cWW-L-cWW-cWW-R-L-tHS-cWW History status: Exact match	13	1
374	IL_99498.1 View exemplar Basepair signature: cWW-L-R-tHW-cWW History status: Exact match	8	1
375	IL_62093.1 View exemplar Basepair signature: cWW-cWW-L-R-tWH-L-R-cWW History status: New id, no parents	12	1
376	IL_22771.1 View exemplar Basepair signature: cWW-cWW-L-R-tHW-tHS-cWW-cWW History status: Exact match	14	1
377	IL_57741.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-R-L-cWW-L-cWW History status: Exact match	16	1
378	IL_79846.1 View exemplar Basepair signature: cWW-R-L-L-tWH-cWW-L-L-L-R-L-R-cSH-L-L History status: Exact match	19	1
379	IL_95727.1 View exemplar Basepair signature: cWW-L-tSH-L-tHW-tHS-R-cWW-L History status: Exact match Kink-turn (1)	14	1
380	IL_04073.1 View exemplar Basepair signature: cWW-L-R-L-tSH-L-R-cWW-L-R-R-L-cWW-L History status: Exact match	18	1
381	IL_11415.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L History status: Exact match	8	1
382	IL_42778.1 View exemplar Basepair signature: cWW-L-R-L-R-L-R-L-cWW History status: Exact match	11	1
383	IL_60448.1 View exemplar Basepair signature: cWW-L-cWW-L-R-L-tWH-L-tHS-L-R-L-cWW-L-R History status: Exact match	20	1
384	IL_68405.1 View exemplar Basepair signature: cWW-cSS-L-tWH-tHW-cWW-cWW History status: Exact match Kink-turn related (1)	11	1
385	IL_14193.1 View exemplar Basepair signature: cWW-L-cWW-L History status: Exact match	6	1
386	IL_20463.1 View exemplar Basepair signature: cWW-tSH-tHW-cSH-tHH-cWH-L-R-cWW-L-L-R History status: Exact match 7x11 Sarcin-Ricin with pseudoknotted region; G-bulge (1)	18	1
387	IL_45601.1 View exemplar Basepair signature: cWW-tSW-L-cWW-L-L-R-L History status: New id, no parents	11	1
388	IL_70670.1 View exemplar Basepair signature: cWW-R-L-R-L-R-L-R-L-R-L-R-tWH-L-R-L History status: Exact match 9x9 Sarcin-Ricin with pseudoknotted region; G-bulge (1)	18	1
389	IL_85630.1 View exemplar Basepair signature: cWW-tSH-L-R-L-R-L-cWW-L-cWW-L History status: Exact match	15	1
390	IL_09570.1 View exemplar Basepair signature: cWW-L-R-L-R-L-cWW-L-L-R History status: Exact match	12	1
391	IL_47108.1 View exemplar Basepair signature: cWW-L-R-L-tHH-L-cWW History status: Exact match	9	1
392	IL_57881.1 View exemplar Basepair signature: cWW-L-cWW History status: Exact match Multiple bulged bases (1)	5	1
393	IL_96102.1 View exemplar Basepair signature: cWW-L-cWW-L-cWW-tWH-L-L History status: New id, no parents Kink-turn related (1)	11	1
394	IL_11540.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L-R-L History status: New id, no parents	11	1
395	IL_26254.1 View exemplar Basepair signature: cWW-cSH-cWS-R-cWW-L History status: Exact match	8	1
396	IL_33367.1 View exemplar Basepair signature: cWW-L-R-L-tWW-L-cWW-tSS History status: Exact match	11	1
397	IL_50858.1 View exemplar Basepair signature: cWW-cWW-L-R-L-cWW History status: New id, 1 parent Decoding loop related (1)	9	1
398	IL_90346.1 View exemplar Basepair signature: cWW-L-R-L-cWW-L-L History status: Exact match	9	1
399	IL_35705.1 View exemplar Basepair signature: cWW-L-cWW-L History status: New id, no parents	6	1
400	IL_85652.1 View exemplar Basepair signature: cWW-tSH-L-R-L-R-L-cWW-L History status: Exact match	12	1

Coloring options:
Nucleotide numbers

Exact match 245; New id, no parents 43; Updated, 2 parents 8; Updated, 1 parent 49; New id, 1 parent 44; New id, 2 parents 9; New id, > 2 parents 2;

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