Motif IL_09732.2 Version IL_09732.2 of this group appears in releases 3.12 to 3.14

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name		1		2		3	break		4		5		6		7	1-7	2-6	3-4
1	IL_5BTP_005	5BTP	0.1288	8	B	ZMP/ZTP riboswitch	C	15	U	16	G	25	*	C	38	A	39	U	40	G	41	cWW	cwW	cWW
2	IL_4ZNP_003	4ZNP	0.0000	9	A	ZMP/ZTP riboswitch	C	12	U	13	G	23	*	C	34	G	35	U	36	G	37	cWW	cwW	cWW
3	IL_4V88_400	4V88	0.8738	0	A6	SSU rRNA	U	283	G	284	G	285	*	C	270	A	271	U	272	G	273	cWW		cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
CUGACGGAACG*CAUG	1
CUGGCGGAUUAG*CGUG	1
UGG*CAUG	1

Non-Watson-Crick part of the motif

Sequence	Counts
UGACGGAAC*AU	1
UGGCGGAUUA*GU	1
G*AU	1

Release history

Release	3.12	3.13	3.14
Date	2018-11-16	2018-12-14	2019-01-11
Status	Updated, 1 parent	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (3)
Basepair signature: cWW-cWW-R-cWW
Heat map statistics: Min 0.13 | Avg 0.42 | Max 0.90

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