Motif IL_09732.2 Version IL_09732.2 of this group appears in releases 3.12 to 3.14
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 1-7 | 2-6 | 3-4 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5BTP_005 | 5BTP | 0.1288 | 8 | B | ZMP/ZTP riboswitch | C | 15 | U | 16 | G | 25 | * | C | 38 | A | 39 | U | 40 | G | 41 | cWW | cwW | cWW |
| 2 | IL_4ZNP_003 | 4ZNP | 0.0000 | 9 | A | ZMP/ZTP riboswitch | C | 12 | U | 13 | G | 23 | * | C | 34 | G | 35 | U | 36 | G | 37 | cWW | cwW | cWW |
| 3 | IL_4V88_400 | 4V88 | 0.8738 | 0 | A6 | SSU rRNA | U | 283 | G | 284 | G | 285 | * | C | 270 | A | 271 | U | 272 | G | 273 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUGACGGAACG*CAUG | 1 |
| CUGGCGGAUUAG*CGUG | 1 |
| UGG*CAUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGACGGAAC*AU | 1 |
| UGGCGGAUUA*GU | 1 |
| G*AU | 1 |
- Annotations
-
- (3)
- Basepair signature
- cWW-cWW-R-cWW
- Heat map statistics
- Min 0.13 | Avg 0.42 | Max 0.90
Coloring options: