Motif IL_10109.1 Version IL_10109.1 of this group appears in releases 0.6 to 0.6
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | break | 11 | 12 | 13 | 1-13 | 3-9 | 6-7 | 6-8 | 10-11 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3UXR_074 | 3UXR | 0 | 3 | A | 23S ribosomal RNA | C | 1934 | G | 1935 | A | 1936 | A | 1937 | U | 1939 | U | 1940 | C | 1941 | C | 1942 | U | 1943 | G | 1945 | * | C | 1961 | C | 1962 | G | 1964 | cWW | cHW | ncSH | ncSH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGAAAUUCCUUG*CCUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAAAUUCCUU*CU | 1 |
Release history
| Release | 0.6 |
|---|---|
| Date | 2012-04-02 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- 13_cWW--cHW---cSH,cSH----cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: