Motif IL_10928.1 Version IL_10928.1 of this group appears in releases 2.0 to 2.0

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name		1		2		3		4		5		6		7		8	break		9		10		11		12		13		14		15	1-14	1-15	2-14	4-12	6-11	7-10	8-9
1	IL_5AJ0_023	5AJ0	0.0000	1	A2	LSU rRNA	A	460	U	461	U	462	C	463	A	464	A	465	C	466	C	467	*	G	675	G	676	G	677	C	678	C	680	A	681	U	682	ncWw	cWW			ntHS	ncWW	cWW
2	IL_3J7P_048	3J7P	0.8878	2	5	LSU rRNA	C	1648	U	1649	G	1651	U	1652	A	1653	C	1655	U	1656	G	1657	*	C	1520	C	1521	G	1522	A	1523	A	1524	A	1525	G	1526		cWW	ntHH	tWH		cWW	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
AUUCAACC*GGGCGCAU	1
CUAGUAGCUG*CCGAAAG	1

Non-Watson-Crick part of the motif

Sequence	Counts
UUCAAC*GGCGCA	1
UAGUAGCU*CGAAA	1

Release history

Release	2.0
Date	2017-04-24
Status	New id, no parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (2)
Basepair signature: cWW-L-R-R-L-tWH-L-R-L-cWW-cWW
Heat map statistics: Min 0.89 | Avg 0.44 | Max 0.89

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