Motif IL_12536.1 Version IL_12536.1 of this group appears in releases 0.5 to 0.5
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | break | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 1-19 | 1-23 | 2-18 | 4-8 | 4-16 | 5-20 | 6-12 | 7-11 | 7-15 | 8-9 | 8-17 | 9-22 | 10-21 | 13-14 | 16-20 | 20-21 | |||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1NBS_010 | 1NBS | 0 | 2 | B | RNase P class B | C | 184 | A | 185 | C | 186 | A | 187 | G | 188 | U | 189 | G | 190 | A | 191 | C | 192 | G | 193 | A | 195 | G | 196 | U | 197 | * | A | 216 | G | 217 | U | 218 | G | 219 | G | 220 | A | 221 | A | 222 | C | 223 | G | 224 | G | 226 | ntsS | cWW | tHH | ntWH | csS | tSW | cWS | ncSs | ncHW | cSH | tWS | ncWH | ncHW | cWW | tWH | cSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CACAGUGACGAAGU*AGUGGAACGCG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| ACAGUGACGAAG*GUGGAACGC | 1 |
Release history
| Release | 0.5 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in IL_12536.1 | Only in the child motif |
|---|---|---|---|
| IL_90057.1 Compare | IL_1NBS_010 | IL_1NBS_003 |
Coloring options: