IL_1NBS_003

3D structure

PDB id

1NBS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the specificity domain of Ribonuclease P RNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

CACAGUGACGAAGU*AGUGGAACGCG

Length

25 nucleotides

Bulged bases

1NBS|1|A|A|194, 1NBS|1|A|C|225

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28058.1

Basepair signature

cWW-tSS-L-L-cSS-tWH-tSW-cWS-cSS-tWS-cSH-cWH-cHW-cSH-R-R-cWW

Number of instances in this motif group

2

Unit IDs

1NBS|1|A|C|184
1NBS|1|A|A|185
1NBS|1|A|C|186
1NBS|1|A|A|187
1NBS|1|A|G|188
1NBS|1|A|U|189
1NBS|1|A|G|190
1NBS|1|A|A|191
1NBS|1|A|C|192
1NBS|1|A|G|193
1NBS|1|A|A|194
1NBS|1|A|A|195
1NBS|1|A|G|196
1NBS|1|A|U|197
*
1NBS|1|A|A|216
1NBS|1|A|G|217
1NBS|1|A|U|218
1NBS|1|A|G|219
1NBS|1|A|G|220
1NBS|1|A|A|221
1NBS|1|A|A|222
1NBS|1|A|C|223
1NBS|1|A|G|224
1NBS|1|A|C|225
1NBS|1|A|G|226

Current chains

Chain A

RIBONUCLEASE P RNA

Nearby chains